NONHSAT134866
Revision as of 02:35, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT134866 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
715 nt |
Genomic location |
chr9-:130683160..130684013 |
Exon number |
2 |
Exons |
130683160..130683361,130683501..130684013 |
Genome context |
|
Sequence |
000001 AGCATCCCCT AACTAATACC GTAACCGCGC AGTCCCGTTT GACGGTGGTG CCgtgcccag catcgtgcca aggactcccc 000080
000081 tactttagct catttaatcc tcaaaaaatg ctattattct ctttttacag accatgaaat ggaggctcag ggggtgaagg 000160 000161 gactgatcaa gatcattcag caataaatgc tggaaccagg actcaaccat ggcttttgga ttccggagcc tgtattcttA 000240 000241 ACCACCAGCT CCTGCAGCTT GGTCCTCATG ATCTGGGCAA GGGGGGAGGC TGAAGGCTGc agccctcttg tcatccagat 000320 000321 ggggaaactg aggcccagag actttaaggg gcgtaagcac gggtaagtgg caaggtcggc cctgagtacc caggcctccc 000400 000401 ggccccctgc tcctggcctG ATACTCTAGG gatgcaggtg ggagaagcag gggtcctggg ggctgcctgg agctctggga 000480 000481 ggcattctga acggggtcta ctactgatct cagGAAACTC CAGCCTGGCC TCTGACCCCA GTTCAATCCG ACCATGCCCA 000560 000561 AGCCCAAGCG GGCCTTTCCT CCAGAACTGC TCCGGGGCct ggctgtgtga ctggagcaag gtgctaaacc tctctgtgcc 000640 000641 tcgctggtct aatctgtaaa atgaaggaat ggaaacagac ctcattaact cattaaatat ttgttgagca cctgc |
Predicted Small Protein
Name | NONHSAT134866_smProtein_431:658 |
Length | 76 |
Molecular weight | 7896.8452 |
Aromaticity | 0.0666666666667 |
Instability index | 50.536 |
Isoelectric point | 7.75518798828 |
Runs | 11 |
Runs residual | 0.0022695035461 |
Runs probability | 0.0245057892117 |
Amino acid sequence | MQVGEAGVLGAAWSSGRHSERGLLLISGNSSLASDPSSIRPCPSPSGPFLQNCSGAWLCD WSKVLNLSVPRWSNL |
Secondary structure | LEELLLLEEEEEELLLLLLLLEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEE HHHEELLLLLLLLLL |
PRMN | - |
PiMo | - |