NONHSAT135227

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT135227

Source

NONCODE4.0

Same with

,

Classification

sense

Length

715 nt

Genomic location

chr9-:134400125..134401546

Exon number

2

Exons

134400125..134400608,134401316..134401546

Genome context

Sequence
000001 CTTGGATCAT GGCCTCTCAC ACCTGGCTGA TGACTGAGTC TGTGTCCCCC ATTTGCCGAT GACACCAGCA CCTCTGAGCA 000080
000081 CCCCAGGGCC GCCCCTCCTG CTGTTGCATC TGTTTCTGAG CATCTTAAAA TCACCTTTGA AGGAAAAGTC CTCACAGGAA 000160
000161 CACCCCCCCT TGTGCCTTAC AGACAAAGAA GTATGCCGAT GTGATCATCC CGCGAGGAGT GGACAATATG GTTGCCATCA 000240
000241 ACCTGATCGT GCAGCACATC CAGGACATTC TGAATGGTGA CATCTGCAAA TGGCACCGAG GAGGGTCCAA TGGGCGGAGC 000320
000321 TACAAGCGGA CCTTTTCTGA GCCAGGGGAC CACCCTGGGA TGCTGACCTC TGGCAAACGG TCACATTTGG AGTCCAGCAG 000400
000401 CAGACCCCAC TGAGGGGCTG CCGAGCCTCA GGGCAGGTCT CCCGCCCGGC ATGTGTGTTC AGGGACTGAG CCTGGGGACG 000480
000481 CCCACCCACA CCCACTGCTT CCTCTCGGCG CACCCCAGGG GAGTGTTAGC AGCGAGGCCT TCCTCACTCA GGAGTGGAAA 000560
000561 CTCAGATGTG TCACTCAGAC TCAACTTGCT GGGACACTGA CAGGCGTTCC TGAGGTTTTC AGCCACTTAG GCTCGTTGCG 000640
000641 GTTTAAAGAT CCCTCTAGGT CACTGAGAAA TGCCACAGAA TGTGCAGGAA GCCTGGGAGG CTTCTGTGAG GAATG
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Predicted Small Protein

Name NONHSAT135227_smProtein_227:412
Length 62
Molecular weight 6810.5946
Aromaticity 0.0491803278689
Instability index 68.9032786885
Isoelectric point 9.61968994141
Runs 10
Runs residual 0.0111173921236
Runs probability 0.0486486486488
Amino acid sequence MVAINLIVQHIQDILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRP
H
Secondary structure LEEHHHHHHHHHHHHLLLEELLLLLLLLLLLEEEEELLLLLLLLLLLLLLEEEEELLLLL
L
PRMN -
PiMo -