NONHSAT136144

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT136144

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2118 nt

Genomic location

chrX-:3857910..3865896

Exon number

2

Exons

3857910..3859823,3865693..3865896

Genome context

Sequence
000001 TTCAGCCTCC CAGAGTGCTG GGATTAAGGG TGTGAGCCAC TGCACCTGGC CCCAAAACTT TCATTTTAAA GACCTGTGTT 000080
000081 TTCTGCACAT AGAGCCGCAG AAACTATTAG TACTGGGGAG TACCAAGCAT GATATTTAAG GGCAACACTG ACTATTCTAA 000160
000161 AATGCACGTG TTTTATTTAA GTCTGTGAAA GTACACAGAT AAAGAACAGT ATCAATGTCA TGTGTCACAG GCAGTAGGAC 000240
000241 AGACAGGGAA AACAATGATA TAAGATAGAA CCACATATCC ATGGTCAATT GACTCAATGT GGAAATAATA AGCTTTTCAA 000320
000321 GAAATGGTGT AAGAATAACT GAGTATTCTT CTAGGAATTT TTAAAAAACC CTTTTTTCAT ACTATTTAGA AGGTTTTATC 000400
000401 AAAATGTATC ATAGACGTAA ATGAAAAAGC TGAACTATTA AGCATCTAGG TGAAAACACA TGAACAACTC TTCTTGAACT 000480
000481 TGGTATAGAA AAGATTTTTT AGGGCTGAGC ATGGTGGCTC ATGCTTGTAA TCCCAGCAAT CTGGGAGGCC GAGGCAGGCA 000560
000561 GATTACTTGA GGTCAGGAGT TTGAGAACAG CCTGGCCAAC AATGATGAAA CCCCATCTCT ACAAAAAAAT GCAAAAAAAA 000640
000641 AAAAAAAAAA AAATTAGCCT GGCTTGGTGG CGTGCACCTG TAATCCCAGC TCCTTGGGAG ACTGAGGCAG GAGAATTGCT 000720
000721 TGAATCCAGG AGGTGGAGGT TGCAAAAAAA AAAGAAAAGA AAAGAAAAGA AAAGAAAAGG TTGTTTAGAT AGGACACTAA 000800
000801 AAGCATGAAT CATAATATTT TTAAAAATGG ATGAAGTGGA CTTTATCAAA ATTCAAAATT ATCTTTAAAC AACATCATTA 000880
000881 ATAAAAGAAA AGATAAGCTG CATACTGGGA AAAAACATTA CATAAAATAT ATTTATTATA TATTCAGAAT ATATAAACAA 000960
000961 CTCAATTACA AAAGACAAGC AACTCAACAG ACTACTGACA AAATATATGA ACAAATACTT CACAGAAAAA TAATACACAC 001040
001041 ACACACACTC TCACACACAC GGAGCCAATA GGTATATAAA CAAAGATACC ATCATTATTA GTGATCAGAG CACTGCAAAT 001120
001121 TAAAGACACA ATGAGATATC CCTACATGAC CACGAGCATA AATAACATTT TCAAGCTTGA CAATAACAAG CACTAAATAT 001200
001201 AAAGCAACTA CAACCCTCCT ACATTCACAG TGCAAAGTGA AACGACAACT TTTGAAAAAC AGTGCAGCAT ATGAACCTAA 001280
001281 ACATGTAACC AAGAAAAAAA AATAGAAATA GCCTATAGAC AAAGACGTGT CCACTGATAC CATGCATTTT TATTCATAAT 001360
001361 AGCTCAGACA GGTAAATACC TCCATTGTAA AAATAAATAA ATAAATAAGC TATTCCACTG GGATTATGAA ATTTTTTAAA 001440
001441 AATTTGCACA GTCTCATTAT CCCTGTGTAT TTAATTTTCT CCTCTGGGAG CCTGCAGCAT TTACCTTGGA AGTGCCCCAA 001520
001521 GCAGGTGACT GAGCCAGTTT CACTCACCTT TGGTTGACCT CACCTGGAAA TAATGGGGAA ATTGTATTTT TCTCACATTC 001600
001601 TAAGCACACC TGGTTGACCT ATGATGCAAT AATAATTACA TAGTTGGGTT CTCTGCACCA GATAGCTCCT TCCATTGCAA 001680
001681 AAACATTGCC ATTCATGCAT TTTCACCCCC CAGCTAAACC TCACATGAAG GTCTAAGAAA GAACAGTAGA TTGTGTCAAA 001760
001761 AATCATTGAT TTCTGAGTTG CTGTTTTTTT TAAAAAATGC TAGTGTTTGG TGCCATCTAG TGGGTTCAAT TTGCTATTTA 001840
001841 AGCCACACAA GAAAATCACC ATAACAGAGG GAAGAGAGAG GATCCTTTTA AAATAAATGA AATCAAGAAT TGCTTTTCAA 001920
001921 AAATAAGTGT GGGCCGGGCG TGGTGGCTCA TGCCTGTAAT CTTAGCACTT TGGGAGGCCG AGGCGGGTGG GTCACTTCAG 002000
002001 GTCAGGAGTT CAAGAACAGC CTGGCCAACA TGGTAAAACC CCGTATCTAC TGAAAATACA AAAATTAGCC GGGATGTTGG 002080
002081 CGGGCGCCTG TAGTCCCAGC TACTCAGGAG GCTGAGGC
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Predicted Small Protein

Name NONHSAT136144_smProtein_1949:2035
Length 29
Molecular weight 3113.5463
Aromaticity 0.107142857143
Instability index 84.9892857143
Isoelectric point 5.89813232422
Runs 5
Runs residual 0.0246478873239
Runs probability 0.0492139198021
Amino acid sequence MPVILALWEAEAGGSLQVRSSRTAWPTW
Secondary structure LLHHHHHHHHHLLLLEEELLLLLLLLLL
PRMN -
PiMo -