NONHSAT136221
Revision as of 02:39, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136221 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
923 nt |
Genomic location |
chrX+:9607860..9613435 |
Exon number |
3 |
Exons |
9607860..9607975,9608313..9608400,9612717..9613435 |
Genome context |
|
Sequence |
000001 AGCTAAAGCG TGTTGTCTTC TCCCGAGGGT GTGCACAGGT TCATGTATCA GCTGAATAAG GCCCTGTTCC AAAAACTGAT 000080
000081 ATTTCAAGGG AACCttaatt tatctttaaa tttaatGCTG GTCCCTGCAG ACGGCTTCCC ATTTTTATGA CCGGATGCTG 000160 000161 GGAAGCCTGC TGGTCCACAG GTCCATACAT GAAGTCACCA TAAGatggag gctcgctctg tcatcctggc tgcagtgcag 000240 000241 tggcacaatc ttgggtcgct gcaacctcca tttcccaggt tcaagtgatt ctcctgcttc agcctcctga gtagctggga 000320 000321 ttacaggcgt gcgccacaac gcccagttaa tttttttgta tttttagtag acatggggtt ttgctatgtt ggccagtctg 000400 000401 gtctcaaact cctggcctca agtaatcagc ccgcctcagc ctcccaaagt gctgggatta acaggcgtga gccaccatgt 000480 000481 ccCGTCAGGG ATGATTTTAT TCTGTGAAAA GCGGCATTCC TTTTCTAACA CAAAACCTCT CCTCTGCTCT GCCCTCCCAA 000560 000561 CCCTGTAGCC TCATTTCCTA TATAGTTGTT TTCATACTGA TTATCTCTGA AGACATTGCC AGGTCGtttt tgtttgtttt 000640 000641 gagacaaggt cttgctctgt tacccaggct ggagtacagt ggcacgatgt cggctcactg cagcctccac ctcccagggt 000720 000721 caagcgattg tcgtgcctca gactcccaaa tagctgggaa tacaggggca tgcctccaca cctagctaat ttttgtattt 000800 000801 tttgtagaga tgggtttcac tgtgttgccc aggctggtct caaactcctg gactcaagtg aGCGACCACG CCCAGCCGAC 000880 000881 ATTCCCAGGT TTTCTTTACG TTTTAATAAA TATGAGTAGT CCA |
Predicted Small Protein
Name | NONHSAT136221_smProtein_686:784 |
Length | 33 |
Molecular weight | 3228.5329 |
Aromaticity | 0.0 |
Instability index | 51.621875 |
Isoelectric point | 6.20135498047 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0290761349585 |
Amino acid sequence | MSAHCSLHLPGSSDCRASDSQIAGNTGACLHT |
Secondary structure | LLEEEELLLLLLLLLLLLHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |