NONHSAT136221

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT136221

Source

NONCODE4.0

Same with

,

Classification

sense

Length

923 nt

Genomic location

chrX+:9607860..9613435

Exon number

3

Exons

9607860..9607975,9608313..9608400,9612717..9613435

Genome context

Sequence
000001 AGCTAAAGCG TGTTGTCTTC TCCCGAGGGT GTGCACAGGT TCATGTATCA GCTGAATAAG GCCCTGTTCC AAAAACTGAT 000080
000081 ATTTCAAGGG AACCttaatt tatctttaaa tttaatGCTG GTCCCTGCAG ACGGCTTCCC ATTTTTATGA CCGGATGCTG 000160
000161 GGAAGCCTGC TGGTCCACAG GTCCATACAT GAAGTCACCA TAAGatggag gctcgctctg tcatcctggc tgcagtgcag 000240
000241 tggcacaatc ttgggtcgct gcaacctcca tttcccaggt tcaagtgatt ctcctgcttc agcctcctga gtagctggga 000320
000321 ttacaggcgt gcgccacaac gcccagttaa tttttttgta tttttagtag acatggggtt ttgctatgtt ggccagtctg 000400
000401 gtctcaaact cctggcctca agtaatcagc ccgcctcagc ctcccaaagt gctgggatta acaggcgtga gccaccatgt 000480
000481 ccCGTCAGGG ATGATTTTAT TCTGTGAAAA GCGGCATTCC TTTTCTAACA CAAAACCTCT CCTCTGCTCT GCCCTCCCAA 000560
000561 CCCTGTAGCC TCATTTCCTA TATAGTTGTT TTCATACTGA TTATCTCTGA AGACATTGCC AGGTCGtttt tgtttgtttt 000640
000641 gagacaaggt cttgctctgt tacccaggct ggagtacagt ggcacgatgt cggctcactg cagcctccac ctcccagggt 000720
000721 caagcgattg tcgtgcctca gactcccaaa tagctgggaa tacaggggca tgcctccaca cctagctaat ttttgtattt 000800
000801 tttgtagaga tgggtttcac tgtgttgccc aggctggtct caaactcctg gactcaagtg aGCGACCACG CCCAGCCGAC 000880
000881 ATTCCCAGGT TTTCTTTACG TTTTAATAAA TATGAGTAGT CCA
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Predicted Small Protein

Name NONHSAT136221_smProtein_686:784
Length 33
Molecular weight 3228.5329
Aromaticity 0.0
Instability index 51.621875
Isoelectric point 6.20135498047
Runs 5
Runs residual 0.0353954081633
Runs probability 0.0290761349585
Amino acid sequence MSAHCSLHLPGSSDCRASDSQIAGNTGACLHT
Secondary structure LLEEEELLLLLLLLLLLLHHHHLLLLLLLLLL
PRMN -
PiMo -