NONHSAT136384
Revision as of 02:40, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT136384 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
521 nt |
Genomic location |
chrX-:16607672..16609168 |
Exon number |
2 |
Exons |
16607672..16607898,16608875..16609168 |
Genome context |
|
Sequence |
000001 GAGGCCATTG CATGTGATTG GACTGACCTC TTCCTGTGGT GACTAGAAAG TGCTAAAAGA ATATTCTTTA GTATTTTCTC 000080
000081 TCATACTAAG GGGTTAATAT GGAATGTGTT TGAAATTGCA AATTGAATAA TTGTCCAGGT TTTTTTTTTA TACCTTGCTA 000160 000161 AATTAGTTCC TCTTTTAATC TAGTGATAGA TACAGTGATG CCAGTGATGA CAGCTTTTCA GAGCCAAGGA TAGCTGAGTT 000240 000241 GGAAATAAGC TGAAATGAAT ACATGACTGG GAATAATGGG GACTGCCTGT GAGGCCTCTG AAATAATTGA AGGCAAGATG 000320 000321 AAGGAACTAT CTGAAGAAAT CACTACACTC TTAGAGAATC CCTCTGTTCT CCAGCAAACA TGGGATGTAA AGCCTCACAG 000400 000401 GGAATCTGAT AATACATACT TCTGTCAACC AGAACCAGAG GGGTAGTTTT CTTTTCCCTC CAGAGGCAGC CTTTGGTACT 000480 000481 TAAAATATCT GTAGCTGATT AAATTTTTCC CAACAACCTC A |
Predicted Small Protein
Name | NONHSAT136384_smProtein_275:445 |
Length | 57 |
Molecular weight | 6340.9639 |
Aromaticity | 0.0535714285714 |
Instability index | 69.1857142857 |
Isoelectric point | 4.25738525391 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0476064299593 |
Amino acid sequence | MGTACEASEIIEGKMKELSEEITTLLENPSVLQQTWDVKPHRESDNTYFCQPEPEG |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLEEEEEELLLLLLLLLEEELLLLLL |
PRMN | - |
PiMo | - |