NONHSAT136495
Revision as of 02:41, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136495 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
447 nt |
Genomic location |
chrX+:23801275..23802597 |
Exon number |
2 |
Exons |
23801275..23801534,23802411..23802597 |
Genome context |
|
Sequence |
000001 GGCCAATGTT CAAATGCGCA GCTCTTAGTC GCGGGCCGAC TGGTGTTTAT CCGTCACTCG CCGAGGTTCC TTGGGTCATG 000080
000081 GTGCCAGCCT GACTGAGAAG AGGACGCTCC CGGGAGACGA ATGAGGAACC ACCTCCTCCT ACTGTTCAAG TACAGGGGCC 000160 000161 TGGTCCGCAA AGGGAAGAAA AGCAAAAGAC GAAAATGGCT AAATTCGTGA TCCGCCCAGC CACTGCCGCC GACTGCAGTG 000240 000241 ACATACTGCG GCTGATCAAG GTTACAGTCT CTAGCTTCGC CATGTACATG GCCCTTCCGT GTACATGGAT GGGCGGGGAG 000320 000321 GTAACTAAAA GATCCTTTAC ACAATAAAGT AGATGATCAT GATAAATGAG GTAAGGTCCT ATTATCACAC ACTTCAAACA 000400 000401 CGGTAGATCA GAAACCCACT ATGATACTCG CTTCCTGTCT GTTTGCT |
Predicted Small Protein
Name | NONHSAT136495_smProtein_194:346 |
Length | 51 |
Molecular weight | 5544.5803 |
Aromaticity | 0.1 |
Instability index | 64.384 |
Isoelectric point | 9.30059814453 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0709995709995 |
Amino acid sequence | MAKFVIRPATAADCSDILRLIKVTVSSFAMYMALPCTWMGGEVTKRSFTQ |
Secondary structure | LLEEEELLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLEEEELLLLL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii |