NONHSAT136940

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT136940

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1517 nt

Genomic location

chrX+:48432836..48436804

Exon number

2

Exons

48432836..48432961,48435414..48436804

Genome context

Sequence
000001 GGGAACGTTC CGGGACGTTC TCGCTACGTA CTCTTTATCA ATCGTCTTCC GGCGCAGCCC CGTCCCTGTT TTTTGTGCTC 000080
000081 CTCCGAGCTC GCTGTTCGTC CGGGTTTTTT ACGTTTTAAT TTCCAGAAAC CAGGGTGGTT ATGACCGCTA CTCAGGAGGA 000160
000161 AATTACAGAG ACAATTATGA CAACTGAAAT GAGACATGCA CATAATATAG GTGAGACTTG GATATCGGCA TTGAGTGAAC 000240
000241 CTGTTTGTCA CACTCTGTCA TGACCCTCTC ACCTTTTCTG GCAAGACTGC TCTGCATTTC TGCTGCCCTC ATACCTCACC 000320
000321 CAGCCAACCT ACCAAACATT CCTAGCTAGG CCTTCCTTGC TCTCAGGTGC ATATCAGAGC AAGTTTGCTA GGGGGTGGGA 000400
000401 TCTGAAAACC CATCTCCTAT AATCTTCTAC TCTTGTGTGG GATGGAGGAA ATGAAGGTGT GTCCCTGTTG TCCAACCCTC 000480
000481 AGCATCTTCA TCAGCTCTAG GAGGTGAGCA TGTTGTCAGC TGTTACTTCA TGACATCACA ATTCTCCCCC TCTTGCTGTT 000560
000561 CCCAGATACA CAAGGAATAA TTTCTGATCC AGGATCGTCC TTCCAAATGG CTGTATTTAT AAAGGTTTTT GGAGCTGCAC 000640
000641 CGAAGCATCT TATTTTATAG TATATCAACC TTTTGTTTTT AAATTGACCT GCCAAGGTAG CTGAAGACCT TTTAGACAGT 000720
000721 TCCATCTTTT TTTTTAAATT TTTTCTGCCT ATTTAAAGAC AAATTATGGG ACGTTTGTAG AACCTGAGTA TTTTTCTTTT 000800
000801 TACCAGTTTT TTAGTTTGAG CTCTTAGGTT TATTGGAGCT AGCAATAATT GGTTCTGGCA AGTTTGGCCA GACTGACTTC 000880
000881 AAAAAATTAA TGTGTATCCA GGGACATTTT AAAAACCTGT ACACAGTGTT TATTGTGGTT AGGAAGCAAT TTCCCAATGT 000960
000961 ACCTATAAGA AATGTGCATC AAGccagcct gaccaacatg gtgaaacccc atctgtacta aacataaaaa aattagcctg 001040
001041 gcatggtggt gtacgcctgt aatcccagtg acttgggagg ctgaggcagg agaatcgctt gaacccggga ggcggaggtt 001120
001121 gcagtgagct aagatcgcgc cactgtactc cagcctgggc aacagcgaga ctccatctca aaaaaaaagg aaaTGTGTAT 001200
001201 CAAGAACATG ATTATCCAGC GGTATTTTCT AATTCAGATC ATCAAACTGA TTATATAGAA GAGTTGGCTT TAAAATGTTT 001280
001281 GCAAATGTCT TTTTTTTTTT AATACTGGAA GAAAAAATAT TCTGTTGTGT CTCATACAGT GCTTAGGATG TCTTTCACAG 001360
001361 AGCTTATTAA AAAGATGAAA CCTGAGAACA AACTGCTTTA TTCTTACTCA GCCCATTTTG CAAATTAAAA GTgggggcag 001440
001441 aggtgggcgg atcacctgag gtcaggagtt cgagaccagc ctggccaaca gggcaaaacc ccatctctac taaaaat
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Predicted Small Protein

Name NONHSAT136940_smProtein_140:262
Length 41
Molecular weight 4501.0154
Aromaticity 0.025
Instability index 66.615
Isoelectric point 4.71954345703
Runs 7
Runs residual 0.00302419354839
Runs probability 0.0285789991673
Amino acid sequence MTATQEEITETIMTTEMRHAHNIGETWISALSEPVCHTLS
Secondary structure LLLLHHHHHHHHHHHHHHHHHLLLHHHHHHLLLLLEELLL
PRMN -
PiMo -