NONHSAT137659

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT137659

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2754 nt

Genomic location

chrX-:74588262..74591027

Exon number

2

Exons

74588262..74590358,74590369..74591027

Genome context

Sequence
000001 TTTATGACAG ACAAGCCTTG TCTTCTATTC ATATAGATAT GCACCTTTTT CTACATGTAT GGCCTTTACT TACTACACAG 000080
000081 CAAGTAGGCC TCAAAGTAAT CTTCCTCTTT CCCATCAATC ATCTTCTGCC AAGCATTCAG GCAGAGCAGC TGTTAACAGT 000160
000161 GATTCAAAGT CAGAAAAACA TCAAGAACTT CTTTGATGCA TAGGGTGTAT CAGCACTCAG CTCCCACAGA AGTCAAGTCA 000240
000241 CAAAATATAG TGTCAGTTAA CTATAAGGAA GTTCCGGAGA GGTAAAGCTC AGGAAAGATG TAATGCAAAG CTGATTGTTT 000320
000321 AATGTCTTAC AGATTTACAC TGTCTTTAAA AGGCCAAATA AGGCTGGGCG CAGTGGCTCA CACCTGTAAT CCCAACATTT 000400
000401 TGGGAGCCCA AGGCGGCCGG ACCACCTGAG GTCGGGAGTT CAAGACCAGC CTGACCAACA TGGAGAAACC CTGTCTCTAC 000480
000481 TAAAAATACA AAAATTAGCC AGGAGTGTTG GTGCATGACT GTAATCCCAG CTACTCAGGA GGCTGAGGCA GGAGAATCGC 000560
000561 TTGAACCTGG GAGGTAGAGG TTGTGGTGAG CTGAGATCGT GCCATTGCAC TCCGGCCTGG GCAATAAGAG TGAAACTCTG 000640
000641 TCTCAAAAAA AAAAAAAAAG CCAAATAAAT CAGGGTTTTA CCAGGGGCTC AGAGATAAAA AGAAAACCTA TTCCTATCTT 000720
000721 AGCATTTTGG TCTCATTGGT TTATAGACTC TGATAATATA CCTATCCATG GATCATTTGA GTATTGACTA ATGTACATAG 000800
000801 GTACCCAACT GGTTTATTAT TAATCAAGAA TACAGAATTT TATTTAATAA TTAGCACACC CTGATCTGGC TTCTTTGCTT 000880
000881 GGTTTTCTTT GGATCCCTGT CCAATAACCT CTGTGGAATC TCATTCCCTA ATTGTTGATA CTCATTTTCT CCGTTTGCAA 000960
000961 AATGAAGATA CTCATTGTTA GGATCCTACT GCTGAAGGGT GCTATGTCAC TTTCTAGTGC TCTTATATGT CTTTAATTAT 001040
001041 AGGACTGGAA TGAAAAGCTT AACCATACAG TATTTCTAAG CAAAATAATG TACTCCATTC TTTTGTCCAT GCTCTCATTG 001120
001121 CTGATTTGTT CTTGCAGGAC TTAGAGCACT TTGTTAATGT TCTTCCATTC ACTCCAACAG CGTCCTCAGA AAGAGACAGA 001200
001201 ATAAAAAAAT TGTTCCCCAT GGTACAGCTG GAAAAATTAA GGGGAAAAGA GATTAAGTGG TCCCCAATGG AACACAGCTG 001280
001281 TCTTATGCAG GGCTCACAGT TACCATGTTC AGTACATTGT TAAAGTAACT TGGCTTCCCA GGACTGGAAT TATCATGGAG 001360
001361 CAGTTAGAAT TTTGAGAGTA ATTACAACAG GATCACATTC TGAAAGAGTC ACATTTTGTC AAAAATCTGA AAAGTATGCA 001440
001441 ATTTGTACAA CTCTTACTTT CTATGTGATA AGAATGCAAT ATGTGCCTCT TTCCCCTACT AGCCCCATGT GACACATATT 001520
001521 TTTCACACTA TGTGCCATCA ACCAGTGCCA TTACCTCCTG TGGCACCATA GAGCCCAATC TCAGGGCAGA CATTGCCAAG 001600
001601 GTAAAGAATG CACTCCATGT TTATACCAAA TTGCACAAAG TATAGACATT GAGGTTAATG GAGATTTAAG CACAATCCTA 001680
001681 GCAAGTAAGT TTTAAGAATA CTGAATATTA TACATTATTG TAACATGAAC CTAAAATTAA TTTAACAGGG CCCAAATTCA 001760
001761 TAGGAATGTA ACAGTCATTG AAAGCCTATT CTTTTCACCT CTCATCACAC ATATCTACAT ACATGTATGC ACATGTACAC 001840
001841 ACACACACAC ACACACACAC ACATACACAT TTTCTCCAAA GCAGGCTGCC TCTTCAACAG GAGCAAATAC TTTAATTTAA 001920
001921 AAGAATGATT ATCTGTTTTC TCCTTTTAGA AAAAGAGTCT AAGAAACACA GCATGTGAAG AACATTAGAT TTATACATTC 002000
002001 CAGAATCTCT GCTCTCAGAG TAGCTAAGAG ATTCGGTACA GAAGACGTTC TATGGAGAAG CACAGGGGGC ATCTAATGAG 002080
002081 ATTGTCAGGC CCTTGGACAA GATCCATATT CTTAGAAAAT TAATGAGTTC CATCTCGTTA GGAATTGGTT GATGAGGTAT 002160
002161 GGTACATCTG CATTTCTTTA ACCATAGCTG TAATGTACCA TATTAAATTG TAGCCTTTTG CATGCGGGTA TTATATAATA 002240
002241 ATGAATGGGT GGCTCCTAGT AGCATGCAAC CCATGACTGT TTACTTCCCT AAAAGGGTTA GGTCTGTGTC CTGCACAGTG 002320
002321 TTCAAAACCA TTAAATGTGT TCTTTGTAGC AGGATGGTAC ACAGCCATCA GCAGAATGAG TTAAAACCAA CAACGAATTC 002400
002401 AATATACCAG GAAATAGATT GTTAGTAGGG AATGGCATTA AAGGAAAAAA AAATTAGATA AGATGCATTC AAGGAATAAT 002480
002481 TACTTTCACT CTGCTGGCTT AATCAGTGAA GGAACATAAA AGGAAAGCTG GCAGTGGGTC TTGGTAATAT ATGAACTATA 002560
002561 TTAGAGTGCC AGAAAAGGAG ACCTCAGAAG TTAAGCATAG GTTGCCAATC TGCTACAATT ATTTTTCCCA CCAATCTGCT 002640
002641 CAAAATGATT GTATATAGTA TTCTTAAAAC CATGTGTCTT GGTGCAGAAA TATCGACAAA TGCTGGCCAG CTTTATCTTC 002720
002721 CTATATCCTT CATTAAAAGT ATATGCATAT AAAG
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Predicted Small Protein

Name NONHSAT137659_smProtein_38:202
Length 55
Molecular weight 6284.4164
Aromaticity 0.111111111111
Instability index 48.5166666667
Isoelectric point 8.31317138672
Runs 8
Runs residual 0.0145438121048
Runs probability 0.0424284578696
Amino acid sequence MHLFLHVWPLLTTQQVGLKVIFLFPINHLLPSIQAEQLLTVIQSQKNIKNFFDA
Secondary structure LLEEEEEEHHHHHHHLLLEEEEEELLLLLLHHHHHHHHHHHHHHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiii