NONHSAT137674
Revision as of 02:46, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137674 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1096 nt |
Genomic location |
chrX-:75366888..75368374 |
Exon number |
2 |
Exons |
75366888..75367159,75367551..75368374 |
Genome context |
|
Sequence |
000001 ggaacctaca acaaaatagt tttaaaaagc tcatccagga aatgcctatt agagctgatc actttgcttt gaccctccca 000080
000081 taggtgctag acctccagag agagaaaatg agacacataa ggtggaaatt actctgtggt gacacactgt ggagtcctgc 000160 000161 ccacaacccg gatacttgga cccactccac tgaaacctta ggccacagct aagttccttc cttcaaaaaa taaatctaag 000240 000241 aaagaggaaa aacaggaatg acctcctttc aggcactctg ttggttttat ggcgcctctt cttgcgaatg tttgtgtaaa 000320 000321 attgacatac tgtggtcctt ttctgcacaa ttacggcaag gaaaattcag atcgcaaagg tccacctgtg agtataaagt 000400 000401 tcctaagttc tctgtgtatg gctctgcttt cttttttgcc tgcattaagt ctgctgttac atttctactg agataaaatc 000480 000481 caccatttgc atccatccat ttcattttgt tattgttttt gtaaaccaat gagtttgtat taatatctca tgactagagt 000560 000561 tctgaagtaa aagctatagg atttttggtt gtgtggcagg gcaggtctca cagctgaaca gggaggcctc cttaacaact 000640 000641 gtttcagcac tgactggtta aatattaaaa gctgaaagag ccagtgccct tatacaaagg ctgggattta acaaaagccc 000720 000721 accaagaatt ttgcctatgt cctcctgggc cttgaagcat gacaagataa aggaattctt aacaggaccc ctttgggatt 000800 000801 aaacaagttt ttattggagg tctggttcat ctgcatctca ttaccgggta gcaggaataa gtaggctgac cctcagtttg 000880 000881 gaccgggaac agctgtgtaa gtgtgtatgt gtgtgtttat atgtatgtac acgtattttg ttgtgttttg ggccacaagg 000960 000961 taccacactg gcttaacaag tactcataaa ttaattagcc caaatgcttt tcatctttat atgacttaag taaaatctgt 001040 001041 catatgcttg cttaaaaatt attggtaaac taataacaga aatttcttaa aaattg |
Predicted Small Protein
Name | NONHSAT137674_smProtein_257:475 |
Length | 73 |
Molecular weight | 8290.6414 |
Aromaticity | 0.194444444444 |
Instability index | 62.1390277778 |
Isoelectric point | 9.24102783203 |
Runs | 13 |
Runs residual | 0.0396390916464 |
Runs probability | 0.0594350006114 |
Amino acid sequence | MTSFQALCWFYGASSCECLCKIDILWSFSAQLRQGKFRSQRSTCEYKVPKFSVYGSAFFF ACIKSAVTFLLR |
Secondary structure | LLHHHHHHHHHLLLLHHHHHHHLHHHHHHHHHHLLLLLLLLLEEEEEELEEEEELHHHHH HHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHH HHHHHHHHHHLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTT TTTTTTTTTTii |