NONHSAT137745
Revision as of 02:46, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137745 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
538 nt |
Genomic location |
chrX+:82253707..82254244 |
Exon number |
1 |
Exons |
82253707..82254244 |
Genome context |
|
Sequence |
000001 ATGGAGTCAG TTTAATCGAA CTATGAAAAC CAGATTACTT CTTTCACTGA ATACCTCGAA GAATATTTAG ATACAGATGA 000080
000081 GCTGGTATGG ATCTTAGAAA AGCAGCATCT TATTAAAACA GAAACATCTA AGCTCTTGTC TGATATAAGT GTTTGTCTAT 000160 000161 AGTTTACATA CAGAAGGAAA TTTTCACCAA TTTGGGGAAC GGGCCCTTCA TCAGATGCTG GTTGGGGATG TATGCTATGC 000240 000241 TGTGGACAGA TGATGCTGGC TCAAGCCCTT ATATGTAGAC ACTTGGGAAA GGACTGTTAT TGGGAGataa caaaaagaac 000320 000321 aacaacaaca acaataaAAT ACCAATGGAT CCTACAGTGC TTCTTAGAGA GAAAAAATTG TTGCTACACT ATCCATCAAA 000400 000401 TGGCACAAAT GCATCAAATG GCACAAACAT CCATTGCACT GGCCTCGCCT TGTACCTCCA GCCAAGCCAG AAGTGACAAC 000480 000481 CACTGGGGCA TAATTCATTG ACTCTACTGA ACAACTGGAG GAGTTTGATC TGGAGGAA |
Predicted Small Protein
Name | NONHSAT137745_smProtein_344:475 |
Length | 44 |
Molecular weight | 4738.4042 |
Aromaticity | 0.046511627907 |
Instability index | 51.623255814 |
Isoelectric point | 9.03546142578 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0428243369421 |
Amino acid sequence | MDPTVLLREKKLLLHYPSNGTNASNGTNIHCTGLALYLQPSQK |
Secondary structure | LLLHHHHHHHHHHHLLLLLLLLLLLLLLEEHHHHEEEELLLLL |
PRMN | - |
PiMo | - |