NONHSAT139158
Revision as of 02:53, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139158 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
569 nt |
Genomic location |
chrX+:153626090..153626960 |
Exon number |
3 |
Exons |
153626090..153626205,153626406..153626735,153626838..153626960 |
Genome context |
|
Sequence |
000001 AGTCTCCGTG GAGATTTCTC CTCGACCTCT TCCCCGCGGC AATGTGCGAA CCCTGGGTCT CCAGGAAACG GGGATACGGG 000080
000081 GCATGGCTCC CAGCAAGGCC TGGTCCAGCC TCTCCGAAAT ATACGTCTGT CACAGTTAAC GGCAAAGCCT AGGGCAAGAG 000160 000161 TTCTACGCCC AAGATGGCCA GCCGGAAGCG GGCTTCTCGC GACCATGTGG CGAAGCCCCA TTCGTCAGCT GGCCGCCCGC 000240 000241 GGCCCTGGTA CCCGGTCACC TCTCTGATCT GCGCATGTGC TGGGCTACGC CCGGGCGCAA GCGCCAAGAG CGGCTGCGTC 000320 000321 TATGGTCATG ACGTCTGACA GAGCGTCCAC CCGTCTTCGA CAGGACTCTA TGGTTCTTAC GCGCGCAGAC AGACCGCCTA 000400 000401 TATAAGCCAT GCGCAGGCGG AGGAGCGCCT CTTTCCCTTC GGTGTGCCAC TGAAGATCCT GGTGTCGCCA TGGGCCGCCG 000480 000481 CCCCGCCCGT TGGTGAGTCT TGAATCCGTG TACTTTCACT GCTGGGAAAC GGGCGGGGAA AGAAGTGCCT ATGGCCGCTG 000560 000561 AAAACAATT |
Predicted Small Protein
Name | NONHSAT139158_smProtein_173:337 |
Length | 55 |
Molecular weight | 5720.5176 |
Aromaticity | 0.0555555555556 |
Instability index | 46.2574074074 |
Isoelectric point | 10.205871582 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0422691599162 |
Amino acid sequence | MASRKRASRDHVAKPHSSAGRPRPWYPVTSLICACAGLRPGASAKSGCVYGHDV |
Secondary structure | LLLLLLLLHHHLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLLLEELLLL |
PRMN | - |
PiMo | - |