NONHSAT139652
Revision as of 02:55, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT139652 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
984 nt |
Genomic location |
chrY-:23382992..23383975 |
Exon number |
1 |
Exons |
23382992..23383975 |
Genome context |
|
Sequence |
000001 GAAAAGCACC TGGATAGCCT GATGGGCAAA ATTGCCTTTC TGAAGAAATT TCACTAAGAG GAGATCCATC CACTTGCAGG 000080
000081 GGCAGATCCA GTATGTGCAG ATCTCCATAG AGATAAACAT GTTCACCAAT CTCAACCTCA CCTCTTTGCT GGAGGTCATC 000160 000161 TGCCCACAGT AGGGAAAGAT GGCTGCCAAG AGCATGCAGA GCATGCAGAG GAGTGCTTTA AGAGCCCTTT AGACTGCTGA 000240 000241 GCCAGAGCAC TGTCAAGAGG GTCTATGCCA TGCAAGGCAC CAGAAACAAG GTGTCTCAGA GCCACTACCT GCTCAAGACC 000320 000321 AAGAACTTGG AGATCAAAGC ATGCTAGGGC ATGAAGGAAG TAATGGAGAT ATAGCTGCAG GAGCCAAAGG ACAAGTTGAA 000400 000401 CACCTACATC AGTAGTGTGC AGGCCATCAT CCACAAATTA GAAAATGAAT TGAAGATGGC AAAGTTAAAC ATCTGGATAC 000480 000481 CTAAATGAAT ACCAAGTCCT CCAGGTGAAG ATGGCTCTTT GTATTGAGGC TGCAGCTCAG AGGAAACCCT TCAAAGGCAA 000560 000561 GGAGACCCAG CTGAGTTTCA GCAGCATGGG AAGCACACTG CTTCCAGACC CCCTGGTCTT TGGTTTATCA CCTACTGGGG 000640 000641 TTCACATACC AACTCCTACA TGATGTCCAC CCACTCCTTC CTGTCCTACT ACAGTAGCCA TGTGCAAGAG GAGTAGATCA 000720 000721 TGGTGGAGGA ATCCATTGAG AGTGCTAAGA TTGAGGAAGG CAAAGACTAG TACCCCTCTG AAGAAAAAGC CTaggaggag 000800 000801 aaagataata aagaggagga ggaagaggtg gcagggaaga ggactaagct gctaaggaag tgtctaaaga agcaaaggat 000880 000881 aaagaagaaa taggtcaggg tgaagaagga gaggaaaagc tgaagaggag gaaaataaag ttgaaggtgc tggggaagaa 000960 000961 caagcaggta agaagaaATA TTAA |
Predicted Small Protein
Name | NONHSAT139652_smProtein_269:346 |
Length | 26 |
Molecular weight | 2891.3722 |
Aromaticity | 0.04 |
Instability index | 75.544 |
Isoelectric point | 9.86492919922 |
Runs | 6 |
Runs residual | 0.0316981132075 |
Runs probability | 0.0338426661955 |
Amino acid sequence | MQGTRNKVSQSHYLLKTKNLEIKAC |
Secondary structure | LLLLLLLLLHHHHEEELLLEEEELL |
PRMN | - |
PiMo | - |