NONHSAT139655
Revision as of 02:55, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139655 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
623 nt |
Genomic location |
chrY-:23717738..23719956 |
Exon number |
4 |
Exons |
23717738..23717787,23718159..23718285,23718482..23718541,23719571..23719956 |
Genome context |
|
Sequence |
000001 AGGTCATGGT CAGTGGGACC TCCAAAGGAG GCACCCCATT CAAATTGGAG GCTCTGCAGG AGAGGGCAGC CAGGGCGCAG 000080
000081 AGTTCGAAGG CACTCTTGGG GGAGGAGAAG GTGCTGGTGG TGGACAACAT CATGGCATGG TCCAGGTGGT GGTTGAGGAG 000160 000161 AAGCCTGACA TGGAGCCTGG TGGAGGACCA GCAGACAGCC TGGCCCTGGA TCCAGCACAC CCCAGCCAGC CACAGACTCG 000240 000241 CTGGAGGCCC TTCACTTGAA GCAGAGTTCC ATGAATAACC AGTCCACATG GCCTGCCCAC AGCTGAGATG TAAGCTTTGG 000320 000321 CAGAGGTGCC TTCCCAGCCT GGATGGCACA GGGGCCATCA GCCAGGGCAT CTCCAGCTTC TGGGCCATTG TGCAGCACAC 000400 000401 CTACATGTCG GCAGAGTTCA GAAACCATGA GGAAGTCCTG CTAAGTTTCT TCTTGGCATG GCAGGTGGAG GAACTCAGCC 000480 000481 ATCCCAGGTA CCGGCAGCAG GATGAAGTGT TCCTTTTGTC ACAACCTTTA TTTCCACAAT AAAGTGATCA TTAAGGAATA 000560 000561 TCGTGTTCAC ATCAATCCCC TGCAGCACTA CCTAAGGATT AGGTCCTCAG AGAGGGAACA GAG |
Predicted Small Protein
Name | NONHSAT139655_smProtein_5:277 |
Length | 91 |
Molecular weight | 10155.38 |
Aromaticity | 0.0888888888889 |
Instability index | 57.5311111111 |
Isoelectric point | 6.83709716797 |
Runs | 11 |
Runs residual | 0.0176366843034 |
Runs probability | 0.0223378458673 |
Amino acid sequence | MVSGTSKGGTPFKLEALQERAARAQSSKALLGEEKVLVVDNIMAWSRWWLRRSLTWSLVE DQQTAWPWIQHTPASHRLAGGPSLEAEFHE |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLEEEEELLHHHHHHHHHHHHHHHHHHH HHHHHLHHHHLLLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |