NONHSAT142246

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT142246

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

847 nt

Genomic location

chr16+:35071257..35072103

Exon number

1

Exons

35071257..35072103

Genome context

Sequence
000001 TCTTATCTCA GACCCTACTT GGGTTTCTGG GGAATTTCTT TCTTCTTTAC CATTATAGTT TCCTTTATTT CACCAGGTGC 000080
000081 ACATTAAGGT CCACGGATTT TATTCTCAAG TACCTAACTG TAGCCAACTT CTTGATCACC CTCCCTAAAA GAGTCCCACA 000160
000161 GCAGACTGTG GCCACGTTGG GGGTGAAATA TTTCCTCAGT GATATTGGGT GCAAACTTGT TTATGTTCAC AGAGTGGTCA 000240
000241 GGGGTGTGTC CATTGGTACA ACCTGACTAC TGAGTATCTT CTAGGCCATG ATGATTAGCC CCATGAACTT GAGATTGGCA 000320
000321 GAGTTGAAAC TACAAGCTCC CAAGTACATT GGGTCCTCCA AAATACTGTG CTGGATTGTG AATATACCGG TAAATATTAC 000400
000401 TTTTTCTATA AATATGACTG GGAAGTGAAA TGGCAAAAAC AACACAAAGA AAAAGGATGT GGGATACTGC TCTGCAGTAG 000480
000481 TTAACAAATT TACAGGATTA CTGCATATAA CATTGTCATC ATCCTATGAT GTTTTGTGTT TTTGCCTCAT GGCCTGGGCT 000560
000561 AGTCAGTGAC TCCATGGTGT TGATCCTGTA GAGGCACAAG CAGCGGGTCG AACAAACTTA TAGGACCAAC CTCTCTCCCA 000640
000641 GCCCCTCCCC TGAGTCCAGA GTCACTCAAA GCATTCTTGT CCTAGTGAGC ACCTTTCTAT TGTTTCATAT TGTCTTCTCC 000720
000721 ATCTCATCGT TATTTTTTAC CATTTTACCT AACTCCAGTT GGTGGCTGGT GAACACCTCT GCCCTGATTA CTACTTGTTT 000800
000801 TGCTACAGTT AGCTTCTTTA TTCTCATGAG CCATGACCGC AGCATGT
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Predicted Small Protein

Name NONHSAT142246_smProtein_287:427
Length 47
Molecular weight 5179.3018
Aromaticity 0.0652173913043
Instability index 59.7
Isoelectric point 9.86492919922
Runs 7
Runs residual 0.00918737060041
Runs probability 0.0940646528881
Amino acid sequence MMISPMNLRLAELKLQAPKYIGSSKILCWIVNIPVNITFSINMTGK
Secondary structure LLLLLLLHHHHHHHHLLLLLLLLLLEEEEEEELEEEEEEEEELLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
PiMo ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiii