NONHSAT143178
Revision as of 03:08, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143178 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
571 nt |
Genomic location |
chr16-:67867793..67877011 |
Exon number |
4 |
Exons |
67867793..67868003,67869075..67869203,67869441..67869561,67876902..67877011 |
Genome context |
|
Sequence |
000001 ACGTCTTCTC CAGTGGGAGT GATGGGCGCC GGCTGTACGG ATCCCGGAGC CTGACTGCTG TCTACAGTGG CCTGAAGGGT 000080
000081 GAGAAGCACG GCCGCGGAAG CAGATACCAG atggagtctt gcttagtcgc ccaagctgga gtagtgtggc tcgatctcag 000160 000161 ctctgcaacc tctgcctccc agggttcaag caattctcct gcctcagttt ccagagtagc tggaattata gTGCAGATTC 000240 000241 TGGGAAAGTG AACTCCACGG AAGACTCAGA AACCAAGTTC TAATTCAGTT GCCATGAAAA CTTAAGGTGA GAGGATTGTC 000320 000321 AACCAGTGAA AAATACGGAG GAAAACACTA ACAGAATATG atgaagaagc caagacttgg gctgcttgca ttacattaac 000400 000401 cgaggtTTAC CCGCAGCGAG GCTGCCTCCA AAGCATCCGG AGTTTGCAAC CATCACTGTC CACCCCGCGA GCTGCGATAG 000480 000481 TGCGAGAACT ACAATTCCCG TGGGGCTGTG CGGGAGCATC GCGAGAGTTA CATTAACTGT GGCGGCGGGA AGGCGGAGCC 000560 000561 TGCAGCTGGC T |
Predicted Small Protein
Name | NONHSAT143178_smProtein_110:250 |
Length | 47 |
Molecular weight | 4576.1676 |
Aromaticity | 0.0217391304348 |
Instability index | 57.0630434783 |
Isoelectric point | 5.82086181641 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0343910086558 |
Amino acid sequence | MESCLVAQAGVVWLDLSSATSASQGSSNSPASVSRVAGIIVQILGK |
Secondary structure | LLEEEEEELLEEEEELLLLLLLLLLLLLLHHHHHHHHHHEEELLLL |
PRMN | - |
PiMo | - |