NONHSAT143183
Revision as of 03:09, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143183 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
586 nt |
Genomic location |
chr16-:67867928..67877193 |
Exon number |
4 |
Exons |
67867928..67868003,67869075..67869203,67869441..67869561,67876934..67877193 |
Genome context |
|
Sequence |
000001 ACGAATGGTC GGAGCCAGTA TCAGGGAAGC CCTCTTCCCC TACCACCACC AACTGGGGGC CCATAGGGCA CTCGGCAGCC 000080
000081 TCCAGCCCTG CGGTAGCAGC CTGTAACTCC GACGCGGCGG CCGCAGCGGC TGCGCCCTCT GCGGCTGCAA ACTCCACTTG 000160 000161 CACTGTGAGA TCGATGGGCT TCACGTCTTC TCCAGTGGGA GTGATGGGCG CCGGCTGTAC GGATCCCGGA GCCTGACTGC 000240 000241 TGTCTACAGT GGCCTGAAGG atggagtctt gcttagtcgc ccaagctgga gtagtgtggc tcgatctcag ctctgcaacc 000320 000321 tctgcctccc agggttcaag caattctcct gcctcagttt ccagagtagc tggaattata gTGCAGATTC TGGGAAAGTG 000400 000401 AACTCCACGG AAGACTCAGA AACCAAGTTC TAATTCAGTT GCCATGAAAA CTTAAGGTGA GAGGATTGTC AACCAGTGAA 000480 000481 AAATACGGAG GAAAACACTA ACAGAATATG atgaagaagc caagacttgg gctgcttgca ttacattaac cgaggtTTAC 000560 000561 CCGCAGCGAG GCTGCCTCCA AAGCAT |
Predicted Small Protein
Name | NONHSAT143183_smProtein_260:400 |
Length | 47 |
Molecular weight | 4576.1676 |
Aromaticity | 0.0217391304348 |
Instability index | 57.0630434783 |
Isoelectric point | 5.82086181641 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0343910086558 |
Amino acid sequence | MESCLVAQAGVVWLDLSSATSASQGSSNSPASVSRVAGIIVQILGK |
Secondary structure | LLEEEEEELLEEEEELLLLLLLLLLLLLLHHHHHHHHHHEEELLLL |
PRMN | - |
PiMo | - |