NONHSAT144009

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT144009

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

946 nt

Genomic location

chr16-:83768638..83806473

Exon number

2

Exons

83768638..83769523,83806414..83806473

Genome context

Sequence
000001 tgacaTGTTC AGATGTTGGC AAGGCTGAAA ACTGCAGGGG ATCTGGTTGT GATAATCCAG GCCTGAATAT ATACAAATAT 000080
000081 GAACAAGACC CACAAGGACT GCTCATCACC CCAGTATTCC ATTTACAACA TCCTGAATGA ACTCCCGACC AGGCCTATAA 000160
000161 TTCTCTCTTG CAGCCAAATA TCCTGCTTAC TCCTGGTATC TACCTGGTCA GCAGACCTCA TGAGTTATCG CCCAGTGACA 000240
000241 AAACCATCCC AAAGATGCAC CAGTCCAGCA CAAAGTATGA CTGTCAATCT CACAAAAGAT GTAGGGTTCT ACgaggatac 000320
000321 tcagagtata agaattacgc taagtgaaat aagccaagcc cagaaagaca catactttat tatttcatgt atctgtggaa 000400
000401 tctaaaagag tcaaattcat ggcagcaggg agagggctga agaaggggga gatgttgatc aaagTTTCTA tgtatacaaa 000480
000481 gaccaaacca tcacattatg cctcataaat atatacaatt attatttgct aattacaagt aaaGCAATAC AAGAAGAAAA 000560
000561 AAAGGAATCA TAAGTAAATC CATGACAAGT GAAAACGCAA TGGAGAGAAG GGAATCAATG ATTGAAGAAG AGAAAGGACA 000640
000641 GTGGATTTAC AACTGCTTCG AAAGAGTGAT TTGACTGGCA AAGGACTGGG GAGAGGTCCT TTGGGAAATG GACAAAGCCC 000720
000721 TCGAATGGTT AGGAAAGACA ATCTCTTTAT AAATGCAGGG CATAAGCTGA GCACAAGGTG AAGTTTGGCA TGTACTGCCG 000800
000801 TGGGATGTTG TAAAAATTAT GTCAAAAGCA AAGCAATTCT TGGTTCATCT GTGTTCACTG TGAGACTAGC CTATTATTGG 000880
000881 GGTTAAACTT ATAAACAAAC TTCTATTCAT CATTTTTTTC TCCAAAATaa agtgatcaaa ttgtcc
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Predicted Small Protein

Name NONHSAT144009_smProtein_254:346
Length 31
Molecular weight 3668.1081
Aromaticity 0.133333333333
Instability index 103.686666667
Isoelectric point 9.62518310547
Runs 5
Runs residual 0.0355855855856
Runs probability 0.0171347818407
Amino acid sequence MHQSSTKYDCQSHKRCRVLRGYSEYKNYAK
Secondary structure LLLLLLLLLLLLLLLLEEEELHHHHHHLLL
PRMN -
PiMo -