NONHSAT144106

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT144106

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1997 nt

Genomic location

chr16+:85170756..85183049

Exon number

3

Exons

85170756..85170815,85177424..85177547,85181229..85183049

Genome context

Sequence
000001 GGGAGGAGCA GCCCATTTCC AAGCCGGGAT GCAGTTCCAG GGCAGGCAGT AGAGGCCCAG GTGCAACCCC CAGCCCAGGA 000080
000081 GGAGACTTGA CTCGCCTGAG GTCAGCTGGA GCCAGGAACA CCTTTGTGCA ACAGCTGCCG TGGCCCATCT GTGAGAGACA 000160
000161 CGTGGACCCC GTGCCTCGAA ACAGGCAGTG TTGTAAGCAC GGGGACAGAG ACGTACGTGA GCAGATGGAA CCCCCGAAGA 000240
000241 CCTGCAGCTG TCATCCTGGG ACTGTGTGCC CGGCACTGTG CTAAATGCTC CCTGGGGCAT CTCGTGTAAC CTTTGCAGGA 000320
000321 ACCCTAAAAA CGACGATCAG ATTAGCCTCC TCCTCTTGAA AATGGAGACA AAATTCAAAT AACATAAACT TCACCACTTT 000400
000401 AACCATTTTA TTTTATTTAC ATATTTTTTT TGAGACAGAG TCTCGCTCTG TTGCCAGGCT GGAGTGCAGT GGTGCGATGT 000480
000481 AGGCTCTCTG CAACCTGGGC CTCCCGGGTT CAAGCAATTC TGTCTCAGCC TCCCGCGCAG CTGGGACTGC AGGGGTGTTC 000560
000561 CACCACACCC AGCCAATTTT TGTATTTTTA GTAGAGACAG GGTTTCCACA TGTTGGCCAG GATGGTTTCG GTCTCTTGAC 000640
000641 CTCATGATCT GCCCGCCTTG GCCTCCCAAA GTGCTGGGAT TACAGGCATG AGCCACTGCA CCTGGCCCAC TTTAACTATT 000720
000721 TTAAAGGGTA CAATTCAGTG GCGTTCAGTG CAGTCATGAG GTTGTGCAGC CACCACCTGT ATCTCATTTC AGAATATGCC 000800
000801 CATCACTCCA AAAGGAAAAC CCTATCCCCA CGATCCGTGG TTCCCCAGCC CCCTGGCCCC CAGCCCTAAG CAGCCACTAA 000880
000881 GCTGCCTTCT GTCTCTACGG ATTGCCGGTT TTGGGTATTT CATGTCGATG GGATCAGTGT GTGGCCTTGT GTCTGGCTTC 000960
000961 TGTCTCCAGG CATATGTTGT CAAGGGCTAT CATTCCTTTT CTTGGCCAAA TAATGCTCCA TGTTGTGGAC ACATCGTATT 001040
001041 TTGTTTATCC GTTCACCTGC TGATGCATGC CAGATGGTTG TTTCCAACTT TTTAATTCCC ATTATAAAGA TAAGGAAACT 001120
001121 GGCCAGGTGC GGTGGCTCAA GCCTGTAATC CCAGCACTTT GGGAGGCCAA GGCGGGTGCA TCACCTGAGG TCGGGAGTTT 001200
001201 GAGACCAGTC TGACCCACAC AGCGAAACCC CGTCTCTACT AAAAATACAA AAAATCAGCT GGGCGTGGTG GTGTGAGCCT 001280
001281 GTAATCCCAG CTACTCAGAA GGCTGAGGCA TGAGAATCAC TTGAACCTGG GAGGCGAAGG TTGCAGTGAG CTGAGATCGC 001360
001361 GCCACTGCGC TTCAGCCTGG GAGACAGAGA CTCTGTCTCT AAATAAATAA ATAAACAAAC AAATAAATAA ATGTAAACTG 001440
001441 AGGCTAAACC GCTCCACTCA GGGTCAACAC CTGCCCTGTG ACCCAGCAGT TCCACTTTTC GGTATTTATC TAGGAGAAAT 001520
001521 GAGAACACAT GTCCACACAA AGACCTGTGC ACAAATGTTC ACAGCATCTT TCTCTGTAAT AACTTCGAGC TGGCAACGAT 001600
001601 CCAAATATCC ATCCACAGGA GCTGGGTAAA CAAACCGTGG TGTCATCCTG GAGTGGGACG CTCCTCATCA GGAAAGAGGA 001680
001681 AAGAATGACC CATGCACGCA GCAGCTTGGA AGAGTCTCAA AAACAAGATG CCAATGAAGG AAGCCAGGCA CGGGACTGCA 001760
001761 ACTGTAAGCT GTGACTCTGT GTGACTCCAG CGGTACGAAC TTCCAGGAAA AGCAAAAATA TGGGACAGAG TATCCACAAG 001840
001841 TGGCATTCAG GGACTGGAGT GGGAACTGGC AGGGAAAGGG GAAATGTATT GATTATTTCG ATTGCAGTGG TGGGGAGGAG 001920
001921 GGTGGACACC TGTGCCAAAC TCACTTAAAA CGGATGTATT TTATTGTATA AATTATGCCT CAATGAAATC CATTCAT
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Predicted Small Protein

Name NONHSAT144106_smProtein_1019:1147
Length 43
Molecular weight 4756.7719
Aromaticity 0.0714285714286
Instability index 45.7571428571
Isoelectric point 10.8598022461
Runs 6
Runs residual 0.0333031946956
Runs probability 0.0120414532179
Amino acid sequence MLWTHRILFIRSPADACQMVVSNFLIPIIKIRKLARCGGSSL
Secondary structure LLLHHHEEEELLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
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