NONHSAT144756
Revision as of 03:14, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT144756 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
840 nt |
Genomic location |
chr17+:655907..658128 |
Exon number |
2 |
Exons |
655907..656265,657648..658128 |
Genome context |
|
Sequence |
000001 CCGGATCCTA GACGCTTTTT GACGGCTGGT CCTCCCCAGA AAATGCGCCG TGTGAGCCCA AACATGGTGG GGTTTACGCT 000080
000081 GGACCCCGAG CTTGCAATCT GTGCTTGACA AAACACAAAC ATCGCGTGCC TGTCTCCTCC CCCTGAGATC GAGTAGTAAC 000160 000161 AGCCACTCCA ACTCTCCACC TCCAGCTTCT AGCACCAGGG ACCGCCTCCA CCACCCCATG TGCCAAGTGG AGTTCGAGCT 000240 000241 GCGCGGCCCT CAAGCAGCTG AAGGGTCCCG TGAGCGATCA GGAGAAGCTG CTGGTCTACG GCTTGTACAA ACAGGCCACC 000320 000321 CAGGGCGACT GCGACATCCC CGGCCCTCCG GCCTCAGACA TCATGACATC AGGTCAGCTG CAGTTCTCAC TGGGACCAAT 000400 000401 AAACAATAGA AGCAACAACC ATAAAGACTT AAGAGGACAA AGGAAACCAA ACCTCACTGT GTGTCTTCAA GATCTGTTCA 000480 000481 CATAGTTGCA GGAAGTTGCT GTAGACAAAG TACATTACTA AAGAATGAAG CCCACCCAGG ACATCACAGC AACGAAAGAA 000560 000561 CTATTTCTGG TAACTGTGGA CCAGGTGAGA GCCACACTGT AGAACAGCAG TGCTGCCCTC TCTTCTTTGG CGAATGTTAT 000640 000641 GAAGACATTC TGATGCACTT AGGATCATGA TTCATGTTAA ATGTAAATTA ATTGTAAAAA TAATACATCT TGCTCCAAAA 000720 000721 TGTGGTGACA ATTTAGAAGC TGTCCACATA GCCAGACCAC TCTGTAAATC ACAGAACCTA GAAAGTAAAA ATGTGCCATA 000800 000801 ATTAGGACAG CAGAAAGTAA CAGTAAAATA AAGTTTTAAA |
Predicted Small Protein
Name | NONHSAT144756_smProtein_362:484 |
Length | 41 |
Molecular weight | 4543.1095 |
Aromaticity | 0.05 |
Instability index | 50.7875 |
Isoelectric point | 10.0442504883 |
Runs | 8 |
Runs residual | 0.0219758064516 |
Runs probability | 0.0474187422717 |
Amino acid sequence | MTSGQLQFSLGPINNRSNNHKDLRGQRKPNLTVCLQDLFT |
Secondary structure | LLLLEEEEELLLLLLLLLLHHHLLLLLLLLLEEEEHHHLL |
PRMN | - |
PiMo | - |