NONHSAT145226

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT145226

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1182 nt

Genomic location

chr17+:5377610..5389487

Exon number

7

Exons

5377610..5378109,5383374..5383464,5383707..5383902,5384616..5384709,5386129..5386202,5388471..5388536,5389389..5389487

Genome context

Sequence
000001 ACTAGTTCTA GATCGCGAGC GGCCGCCCTT TTTTTTTTTT TTTTTTACAG TGAGAGAAAA ATGGAATTCC GTTTTATTTT 000080
000081 GTCCTCTCTG AAACTTCCAT TTACACCATG GCCTCATCTA TCAAGAAGAG GAAGAAAAGG CTCTGCCTTA TACCATAAAA 000160
000161 ATCAAGTACT CATGTACTTG TTAGAGGTGG CAGGATATTT GTTTCTCCAG TTTTTTGGCT CTAAGAAATT ACACTTTCAG 000240
000241 TACCAGTGTA GTGAGGAACC ACTGGCAAAC TGTTGGAAAT GTCTTCTGGA TTAGTCAGTG TACCATTTCA TAAAGTGCTT 000320
000321 CTGGAGTTAA AATCTGCCAA GCTGTCAAAA GTGTCCACAC TTTTGCAACA AAGGATAAAA GATCCCAGTG GGTATCACCG 000400
000401 AGTCCTTCCC AGCTGGGTCT CATTATTGGC ACTGCTGCTT TAACCTCCAA GCCGCTGGCC CTCACCCCAG GCGAAGCCTC 000480
000481 CTGGCCGTTC CTCAGGTAGT GGATTGTAAT TTGGATCCTC ATCTGGTGTA TCAAAAATAG CTTTCAAAAT AGATGGTGTT 000560
000561 TTCAGAATTC TTATTCCACC AGGTTGATTG GGAAATACAT CTTCCAAGAA AAAATATATG TGTCCAACTG CAATACCCAA 000640
000641 AAGGTCCACA ATGATTGAGT TCCCCAACAA CAAGGAAAAT CCCATGAGCA CCCAGGGCAG AAAGGGGGCC TGGAAGTTGA 000720
000721 GAAGGCCGAA GAAGTTCATG CGGACATAGG GGTTCCTTCG GCTCCACACA TAGACGAGCA TTATTGTAAA GGCCTGGCCC 000800
000801 AAGAAAACTA AGCTCACAAA CAGACCAAAA AGGGTCATTA AGAATCCACC AAAAAGGAAC ATAAATACAA AGTCTGCTGT 000880
000881 CCGACCTCGG AAAGAGCCTT CTTCTAGCAT TCGACAGTAA CGATATAGAA AAATCATGTT AAATAAAAAA TTGAATCCAA 000960
000961 CTGGCCCAAA AAAATAAGAA GTTGGTGATT AATCTCCATA TTTGAAAGTG TTTAAAGATT AATTCAGGAT TGAAGTACAA 001040
001041 CTGAAAAGGT GTGATCAATT CCAACTGCAC GGCGGCGGTG GTGAGGACGC AGGCAGTGGT GTAGGCGCGG CTGACCGGTG 001120
001121 GGATCTGCAG GTACTCCAGC CGCAAGCTCT GGTACGCCAT CTTCCCTAGT TCTAGATCGC GA
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Predicted Small Protein

Name NONHSAT145226_smProtein_278:442
Length 55
Molecular weight 5985.1355
Aromaticity 0.0555555555556
Instability index 44.6203703704
Isoelectric point 10.2888793945
Runs 11
Runs residual 0.0410117434508
Runs probability 0.0433909845675
Amino acid sequence MSSGLVSVPFHKVLLELKSAKLSKVSTLLQQRIKDPSGYHRVLPSWVSLLALLL
Secondary structure LLLLLEELLHHHHHHHHHHLLLLHHHHHHHHHHLLLLLLEEELLHHHHHHHHHL
PRMN -
PiMo -