NONHSAT145272

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT145272

Source

NONCODE4.0

Same with

,

Classification

sense

Length

518 nt

Genomic location

chr17+:6544628..6546439

Exon number

4

Exons

6544628..6544818,6545073..6545154,6545569..6545644,6546271..6546439

Genome context

Sequence
000001 AGGCAGAGTC TTGGTTCCAG ACATCCGCGG AGCAATCTGA GCTGTCCCCA AGTCTCCTTC TATTAAATCC TACCCCGCCC 000080
000081 TGCCAAGAGC GCTCTTCCTT TTACCACCTT ACCCGGATGA TCTTGGAATC TAGTTCCTTA AAACTTCTCA CTCCCCCAGT 000160
000161 ACCATTAGTG TCTTACAGGA TACGTGAGTT GCTGAACCAG TCGTACGAGA GGGGCTGAAG CACATTAGTG AAGGATGTGT 000240
000241 GTTCATCTAC TGCCAAGTAG GAGAAAAGCC TTATTGGAAA GATCCAAATA ATGACTTCAG AAAAAACTTG AAAGTAACAG 000320
000321 CAGTGCCTAC ACTACTTAAG TATGGAACAC CTCAAAAACT GGTAGAATCT GAGTGTCTTC AGGCCAACCT GGTGGAAATG 000400
000401 TTGTTCTCTG AAGATTAAGA TTTTAGGATG GCAATCATGT CTTGATGTCC TGATTTGTTC TAGTATCAAT AAACTGTATA 000480
000481 CTTGCTTTGA ATTCATGTTA GCAATAAATG ATGTTAAA
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Predicted Small Protein

Name NONHSAT145272_smProtein_116:217
Length 34
Molecular weight 3803.4286
Aromaticity 0.0606060606061
Instability index 46.4545454545
Isoelectric point 8.25335693359
Runs 5
Runs residual 0.0326086956522
Runs probability 0.0296767355591
Amino acid sequence MILESSSLKLLTPPVPLVSYRIRELLNQSYERG
Secondary structure LEEELLLLLLLLLLLLLHHHHHHHHHHHHHLLL
PRMN -
PiMo -