NONHSAT145304
Revision as of 03:17, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145304 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
519 nt |
Genomic location |
chr17+:6803233..6857426 |
Exon number |
2 |
Exons |
6803233..6803304,6856980..6857426 |
Genome context |
|
Sequence |
000001 GACAATTCCA GGAGGAACTG GCTTCCATGG ACAAGGAGAT TGAGGTCCGG AATGCAGTCC TGGACCTGCC CTttttccac 000080
000081 caatatatac atccctaaac aacatgactt agttttgAAA CACTGAGCAG CAAGCACCAA TCTAGAAGAA TAAGGAAAGG 000160 000161 GTGATGTTAC CACTGTTTGA GGAAGGCTCA GGAGGAGAAG ATAAACTGAA CAGCCTCTCG GTCATTGTCT GGCTTCAGCT 000240 000241 TCCCTAAGCA TTTATAAGAG CTTTTTATGG GAAAATCATT GAGTAAGATG ATGAGTAACA CTGGGAATCA CTGGGCTCAG 000320 000321 CACAGGTGAG ACATACGGTA ACGCTGGAGA ATGGGCCGAG TTTTAGATGT TTGGCCAGGA TATAGTCAGA AGGAGATGGC 000400 000401 TGTTGTGTAT ATTCTGCTCA TCACGACTTC TCCTCCACTT CCCAGAAGAG GTCAAGGCAG AACATTTCTG GATGACACCC 000480 000481 ACAGTAGATC AAGCATCAGA GCACTCGAGG AATGAGCAG |
Predicted Small Protein
Name | NONHSAT145304_smProtein_350:514 |
Length | 55 |
Molecular weight | 6144.9921 |
Aromaticity | 0.0740740740741 |
Instability index | 59.9833333333 |
Isoelectric point | 8.27410888672 |
Runs | 9 |
Runs residual | 0.00397470641373 |
Runs probability | 0.0405503542759 |
Amino acid sequence | MGRVLDVWPGYSQKEMAVVYILLITTSPPLPRRGQGRTFLDDTHSRSSIRALEE |
Secondary structure | LLEEEELLLLLLLLEEEEEEEEEEELLLLLLLLLLLLEEELLLLLLHHHHHHLL |
PRMN | - |
PiMo | - |