NONHSAT145320
Revision as of 03:17, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT145320 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
794 nt |
Genomic location |
chr17-:6919137..6922973 |
Exon number |
3 |
Exons |
6919137..6919333,6920388..6920707,6922697..6922973 |
Genome context |
|
Sequence |
000001 AGCTGCCTCT CCCGCCGAGT TGGAGACGGA TGGGCTGGGA CGGGTTTTGG GGGGGTGTCC CCAATTCTGA CTGGGAGTGG 000080
000081 AGGAACCCCT CCTGAGATCT CTTGTGGGGG TGCCCCCTCC CCAGGGCACT CCCCAGTCCC TGAGCCAGCC GAGAGGAAGG 000160 000161 AGGCCAGCGA TGCGACTGGG GCGGCTCCTT TCTCCTGCAC CCCAAATGTG AGGGATGCAC CCTAAATTTT GCTCTTTTCA 000240 000241 AAATAGGGGA CCAGGATCTC AGGGGAGAGT AGCTGAGGCC TTGCTCGGAG TCCCAGGAGA TCCACAGGTC CGGCATGAAC 000320 000321 AGTGAGAGGT CAGAGGTGGA AGGCTCAGCA GGAGAGGAGA GGAGGATCAG CAGAGGTCAT GAGAAGGCCA GAATCCAGGG 000400 000401 TCAGGCTGTC TGGAACAGGA AGTAAAATGG GCCGAGATGG AGCGAGCCCC CAGTGTGCTT CCAAGGCCAC TCCCACCTCC 000480 000481 CTGAAACACC CTGCTACGTA CTGATCCAAT GCCCTGCGCT GTGTATGAGA GCACCTTCTC TTCTGAAACC CCTATACAAG 000560 000561 GGAGGGGCCC CTGCGGAGAC CGTGCCCTGC CATCCAGTCC TCAAGGGGAT TCTAAAAAAC TAGTGACAAA GTAGGGAAGC 000640 000641 AGCTGAGCTG GAAAGGAGTT CTGAGGACGA TGGAACCTTG GGTAAGGAGG AAGAAGGCTG CCCACCCGCC CTTTTCTGGC 000720 000721 AGCCACCCTC CCTCACACTG TCCGTTCCTT GATGACACAG CTGATGTGAT TAAGATCGTC CCCAAATCGC TTCA |
Predicted Small Protein
Name | NONHSAT145320_smProtein_314:424 |
Length | 37 |
Molecular weight | 4139.4922 |
Aromaticity | 0.0277777777778 |
Instability index | 61.9194444444 |
Isoelectric point | 9.95452880859 |
Runs | 6 |
Runs residual | 0.0137917637918 |
Runs probability | 0.0394953777306 |
Amino acid sequence | MNSERSEVEGSAGEERRISRGHEKARIQGQAVWNRK |
Secondary structure | LLLLLLLLLLLLLLLEEEELLHHHHEEEEEEEEELL |
PRMN | - |
PiMo | - |