NONHSAT145765

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT145765

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2005 nt

Genomic location

chr17+:14207057..14209062

Exon number

1

Exons

14207057..14209062

Genome context

Sequence
000001 TACCACCACC ACTCCCCCTC CTCCTGGGAT GGTGATTCCA GGGCCAGGCG GCAGGCTATA ACTAGCGCCC TTCCAGGTGG 000080
000081 AACCCGCCAG AGCCCCGAGG CAGCCTAGGA TTTTCTGAGA TCAGACACAC TTGGGCCGGG TTGGGAGGAA CTGGCAGGAA 000160
000161 AAGGACTGAA CCCTTAATGT CAGGCGGTTT TGAAGCACCT GGGGCAAGCT ATGGAAATCC CCACAGGAAG GCTCACGCAG 000240
000241 TCTCTTAGGC GGCTGCCCTC CACCTGCCAC GTTCTTTTTG ATTGACTAAA AAACGCTGAA TGAAGAACGA AGTCGCGTGG 000320
000321 AAACCCTCGC CGCGCGCCTG CAGCGGACAG CGCAGCCCGG GAGGTTCGGC TGCCGACTTG CGCCCGGGGG CTGCGCTGCG 000400
000401 AGCGGCCACG CATGGCGGCT GGACCCGGGC GGCCGCAAGG GCTTGGCTGG GCCGCGGGAG GCGGGAGGTT CTTCGTCCTC 000480
000481 CCGAGCCATC TCCCTGAACT GACAAGCAGG ACTCCCGGGT CCAGGGGGCA CAGGGCCCGG GGCGGTGACC CGGCGGATCG 000560
000561 GGCTGCCGGA GGAGCCCACT GTAAATGCCG CAACTGGCCC CAAACACTGC GTTCCTGGAC TGCACCAGCA GCTCCTGGCG 000640
000641 CGGCCGCAGA GTTGGTGGAT ATTTTCCAAG GGGGAAAAAA ATCTTTTAAA TGCCATCTGT TTACTTTAAA AATGTTGATT 000720
000721 ACTTAAGAAA AACGAATGGA TGTCTGGGCA AAGGTATGGA CGTCACAATT ATTTTGAAGG CGTCCTTTTT AACTTTAAAC 000800
000801 AGACCACGCC AGGAGGAGAC TGCTGACCCA GAGCGCATTA CCTAAAATCT GGTACCCAGA GTGCACCCTT CGCCCTCGTT 000880
000881 GGAGTTCTCT CCTCTCTGCC AAGCTTTGCT CCGTGCCAGA GGTGTGCTCC ATTGTACCTC CGCTCTGTCC CTGCAGTCAG 000960
000961 GCAACCAATT GGAGAAGAGT ATAAATAGTA ATTAACCAGG GAGAGTTGTA ATTCAGAAAC CTAGTTAAAA CAAGTCCTCA 001040
001041 AAAACTAGAG AATATGAGAG TGGGGAGACA TTTTGAAGGC ATTAAGAACA AAAAACGATG GGGACGAATG GTTGAGTCTG 001120
001121 AGGATCAGCA TCGTAATCTG TTAGAGAACG AGGTCGTGGC TGTGTCTGTG AGTCGTTAAT GGGTTTAATC GGTTGATACA 001200
001201 CAGCCTGCTA GTGGCCTAAC CAGTAACCCA GGGCCTGGCA GATTTGCATG ACATCTCGGA GTTTGATTGC TCTTCCTTCC 001280
001281 ACTTGGCAAA AGGAGACACC ATCAGCCGGA TCAGGAGGGG TCATGGTGAG ATGGAACCCA CCGAGGTGGT GTACAGAGCT 001360
001361 GGCGCTGCCA ATGGCCAGAG TGGCAGCCTT TCTACCTCCT TAACCCTGCA AAAATCAAAC GTGCTAGTAC GCACTGTCCA 001440
001441 TCCACACTGG AACTCCAGTT GGTTTTAGTC TGCGATGATG ACTCTTCTGG GTTGACTTTT CCAGTTCATT ATGCAGCCCT 001520
001521 CTTGAAGCAG GCCTCCCAAA CTTAGCAGAC ACCAATGAGA ACCTCACAAA GAGGCTCATC AAGCAGGCTG GTGAAACTGG 001600
001601 GTGTTACTTC CTGTTCCATG GGTACCCCAT AGTGTTTGGG AAACACCGGG CTGTGGTTCA GGAGAATTTC ACATATGCTA 001680
001681 AGATGGAGAA AGAACCTGCC CTTTACATTT AGGCTTGGGA TGTTAATTTA AAGTTTGAAT GACCAAAAAT TAAATCTGTA 001760
001761 ACTTTTAAAG TTTCTCTTTG TGATTTTACT TAAGTGTTGG TAGATATTCT TAAATTGTAA TGACCTCAGT TTGGGAATTA 001840
001841 AGTTAGCCAA ATATTGTGTA ATTATTGTTT GTTATACAAA AATATGCCTT AGACTGTACA GCGGCAGAAA CTCCCTCTAC 001920
001921 CACCTCGGTC CCCCTTTCCA TTCTGCGTTA TACAAAATAA GCTGACACGT TAATGCTGTG GCCCACATTA AACAAAGTAT 002000
002001 ACCGT
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Predicted Small Protein

Name NONHSAT145765_smProtein_299:496
Length 66
Molecular weight 6885.7395
Aromaticity 0.0461538461538
Instability index 79.2476923077
Isoelectric point 11.8294067383
Runs 9
Runs residual 0.0118269230769
Runs probability 0.0420518557773
Amino acid sequence MKNEVAWKPSPRACSGQRSPGGSAADLRPGAALRAATHGGWTRAAARAWLGRGRREVLRP
PEPSP
Secondary structure LLLEELLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLHHHHHHHHHHHLLLEEEELL
LLLLL
PRMN -
PiMo -