NONHSAT146136
Revision as of 03:21, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT146136 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
894 nt |
Genomic location |
chr17-:17924010..17925108 |
Exon number |
3 |
Exons |
17924010..17924312,17924437..17924977,17925059..17925108 |
Genome context |
|
Sequence |
000001 GGAGGTGCTC GTCAGCCACC TGGCATCTTA CAACACATGG GCTTTACAAG GTCCTGTGAG TGGAGAGGCA CAGAGTGTTC 000080
000081 TGGGCTAGCT GAGTGTGGAG GCTGGGTGGC TCTGATGCTA GCCAATCACT CTACGCTCTA GGCTCACACC TTTCCACCTT 000160 000161 CGACTTCGcc agcagaagtc ttgagttcaa tctcattgcc ctggcttggg tcacatgtcc atccatgaac caatcactag 000240 000241 actgggtgcg gaaagctctg atttgccaag ttcgggtcat gtgtctcact aggtaagagc agaggaggat cacccccaGG 000320 000321 GAAGACCAGA GTGCTCTTTC AGAAGAGTGG GACAATCGCT GGATGGCTCT TTGCACCACT CACTCCTGTT CTCTGCTAGG 000400 000401 GCTGCTGGGA CTCACAAGGG GTAGGTTGTG GCAGCTGCCC TGTTTTGGGT TCTGACTTGG CTTGTGTCCC TGCAGGGATT 000480 000481 GAGTTTGTAG CTGCCCAGCT CAAGTCCATG GTGCTAACCT TGGGCCTGAT TGACCTGCGC CTGACAGTGG AGCAGGCCGT 000560 000561 GCTGCTGTCA CGCCTGGAGG AGGAGTACCA GAAATCAAAA TCAAGGACCA GCAGAAGTAT TGTCAAGTAg gcctggcatg 000640 000641 gtggttcaca cctgtaatcc cagcactttg ggtggctgag gaggatggat catttgaggt caggagtttg agaccagcct 000720 000721 gggcaacatg gcaaaaccct ctctctacaa aaatacaaaa attagcacct gtagtctcag ctacttggga agctgacgtg 000800 000801 ggaggattgc ttgaacctgg gaggtggagg ttgtagtgag ccaggattgt gccactgcat tctagcctgg gtgacagagt 000880 000881 gagaccctgt ctca |
Predicted Small Protein
Name | NONHSAT146136_smProtein_362:454 |
Length | 31 |
Molecular weight | 3295.9628 |
Aromaticity | 0.1 |
Instability index | 44.4833333333 |
Isoelectric point | 8.71185302734 |
Runs | 7 |
Runs residual | 0.0310810810811 |
Runs probability | 0.0303076185429 |
Amino acid sequence | MALCTTHSCSLLGLLGLTRGRLWQLPCFGF |
Secondary structure | LEEELLLLHHHHHHHHHHHLHHHHLLLLLL |
PRMN | - |
PiMo | - |