NONHSAT146458

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT146458

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

1205 nt

Genomic location

chr17-:19199909..19209574

Exon number

3

Exons

19199909..19200651,19207128..19207251,19209252..19209574

Genome context

Sequence
000001 AGACGTCGTT GTGAGACAGG CCTGAATGGG CCCTTCTGAC CACCTGAGCC TGGCCTTGGC TCTGCTCTGA GGATCTGAAG 000080
000081 GTTCAGAGCT CACAGGGACC AAGGGAAAAA GCAAGTGCTG GGGGATGTGC CACTCTCTCA TTGTTGCAGG TTGCTTTCCC 000160
000161 AGACACTCAC TGGAAGGAAG AACGGGAATT GTTAGTTTAA GCTCATCACT AAAGTCGCAT CAAATGCACG GACCTTCTCC 000240
000241 AGGAAGGCGG CCTTTTGCAT TATGAACCCC ACTGGAAGAG CTCCAAGTCT TCACTTGCTG TGGTCAAGAA CTGTAACCAC 000320
000321 AGGAGAGACG GGATTTCACT ATGTTGGCCA GGCTGGTCTT GAACTCCTGA CCTCGTGATC TGCCTGCCTC GGCCTCCCAA 000400
000401 ACTGCTGGGA TTACAGGCGT GAGCCACCCC ACCCGGACTA CACCAGACCT ATGATTCAGA TCTGTCAGCA CTTTTGGGGA 000480
000481 TGTGGGTCTT GCCCTGGCCT TCAGTTCCTC TCCAGATTAA GAACCTGCAT GCTTTGCCCA CAGACAGATG GCTACAACAA 000560
000561 AACTGCACAA CTTGGTAGAT CCAGACTGCC AGTGGTCATT CTATGCAGCC AGGGCCCTGT CACTAAAATC TGTAGGCTGT 000640
000641 TCAGTGTGAA GATGAGGAGT GACTGACAGT CCAACGTCAG GGCAAGGATG ACTTAGGGAT CTTCACCCAG AGGAATACTA 000720
000721 TGTACAACTG TTAAAATGTT TACAGGGTGT GTAGGAACCA CAGAAAATGC TTCTGTTTCA ATGTCACAAG ACAAAAAGCA 000800
000801 GGAATGCAAA GTTGCGTTCA CAGTGTGAAA AAGAAAATGC TTGGGAAAAA GTCCAGAAGG AACTACACCA ACACGTGGCC 000880
000881 GGGCATGATG GCTCAGTCCC GTAACCCCAG CACTTTGCGA GGCCACAGCA GGAGGATTGC TTGAGGCCAG GAGTTCCAGA 000960
000961 TCAGCCTGGC CAACATGGGA AGACCTCGTC TCTACTAAAA ATTAAAAATT CGGCTGCGTG TGGTGGTGTG CGCCTGTACT 001040
001041 TCCAGCTACT AGGCAAGGCT GAGGTGGAAG GATCGTTTGA ACCTAGGAGT TCGAGGCTGC ATGGGCCATG ATTGTGCCAC 001120
001121 AATGCTCCAG CCTGGGCAAC AGCAAGACAC TGTCTCAAAA CAAATAAATA AAAATAAAAA TAAATACACA AAAAAAAAAA 001200
001201 AAAAA
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Predicted Small Protein

Name NONHSAT146458_smProtein_803:943
Length 47
Molecular weight 5317.1962
Aromaticity 0.0434782608696
Instability index 77.8739130435
Isoelectric point 12.016784668
Runs 6
Runs residual 0.0309265010352
Runs probability 0.0120414532179
Amino acid sequence MQSCVHSVKKKMLGKKSRRNYTNTWPGMMAQSRNPSTLRGHSRRIA
Secondary structure LLEEEEHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELL
PRMN -
PiMo -