NONHSAT146856
Revision as of 03:22, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT146856 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
819 nt |
Genomic location |
chr17+:20833068..20842832 |
Exon number |
3 |
Exons |
20833068..20833280,20834906..20835084,20841406..20842832 |
Genome context |
|
Sequence |
000001 TGGATTGAAC TCGTGATTAG CCTTCTTCAG CATATGTAAA ATGATGTCTG CTTTTCTTCT CTATTTGTCA TTTTACCGAC 000080
000081 TTTTTATATA TAGTAGTTTC CCCATATCCA TGGAGGATGT ATCCCAAGAC CCCCAGAGGA TGCTTGAAAC CACAGATAAT 000160 000161 AACAAACTCT ATGTATCCTA TGATTTTTCC TGTACATCCT TACCTATCAT AAAAAATTGA AGTTGAAGTA TAAGGAGAAT 000240 000241 TTTTACATCA CCCAGGTTCT AATTTGGAAG GTTTCTAACA GCCCTCTGTC CTCTTCTGGT GCTCACTGTG AAAGAATTTG 000320 000321 CACCCTGCAA CACTAAGTGT TTGTGCTAGA ATCCACTTCT GATGTTGGCT GCTCTGACAC AGCTTCCATT CGGAAGCGGT 000400 000401 CACATCCAGA CTCACCAGGC CTGAGATGTT GGAAGATGGA GAAGCCTTTG CCACAGGAAA AATCCTCCAT GAACACAATG 000480 000481 AAACTTGGCC TGCACCTGGG ACATCCTTCT CCACGGCTAG TCTACAATGC AGGTGCTCTG CACACGCTCC CTGGCTGACC 000560 000561 CCAACGCAGA GAAGATGCAC GTGAGCCCAC CCCCACAGCA GGCGTGGACA TTTGCCTCCC TTTTATAATA GCTGTATTCA 000640 000641 AATGAGGTAT CCTGGAAGCC TCGTTCTGAT AGGATGAGAG CAGACTCTGT ACTACAACAC GGATTGGATA ATAGTCTCCA 000720 000721 ACTCTGATTG GTTAAGATTG TGCAATCAGA GATGGAAATT ATTATCCAAT AAGAGTTGTC AAAAAGGTTC CTTGCGCAGT 000800 000801 GGTCGTCATA GTTCAGAAG |
Predicted Small Protein
Name | NONHSAT146856_smProtein_425:583 |
Length | 53 |
Molecular weight | 5743.3657 |
Aromaticity | 0.0769230769231 |
Instability index | 41.4 |
Isoelectric point | 6.23162841797 |
Runs | 8 |
Runs residual | 0.00347674923946 |
Runs probability | 0.042141406112 |
Amino acid sequence | MLEDGEAFATGKILHEHNETWPAPGTSFSTASLQCRCSAHAPWLTPTQRRCT |
Secondary structure | LLLLLLLEELLEEHHHLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |