NONHSAT147117
Revision as of 03:23, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT147117 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
577 nt |
Genomic location |
chr2-:152646149..152648600 |
Exon number |
2 |
Exons |
152646149..152646396,152648272..152648600 |
Genome context |
|
Sequence |
000001 cttgagccca ggagttcaag gctgcggcga gctgtgtttg cactccagcc taggtgtcag agtgagacta tgtctttaaa 000080
000081 aaaaaaaaaa agaagaaaga aaTGTATTAT AACATTAGGA GTTGTAGGCG GCAACATTAC AACCAGTATT TTTCTGATTA 000160 000161 CGATTTTGTA TGTTACAGAT ATTCTATATT GAGCGCATTA TACCAATAAT CAGAAAACAT TGCTGAATCA TTTTGTCTTT 000240 000241 AAAGAATCAT CTAATAGGGA TGGGAAGGAA TACAAAAGTT GTATTAAGTA AATGGGATGA AGCTCTCAGT TCAGAGATCA 000320 000321 AGATGATTGG GGGATAAGAA GAAGAAAAAC ATTCCTGCAG GACTGGTCTG GGCAGAAGAG GAGTTGTGGT AACTAGATAT 000400 000401 GAGGAGAAAG AGAGGAAGGA GGCACAGAGC AGTTGGAGCT TGCTGCCTGG AAGAATGACG GTATGATAAA GAGATGGGAT 000480 000481 GATGTGAAAT AATTCACATT GTTAATTATG AAGTGTGTTT TGAATCACCT CAGTGTTACC CAGAAACGAC ACTCGGTTAT 000560 000561 CATGTTCAGA TAGGGGA |
Predicted Small Protein
Name | NONHSAT147117_smProtein_101:208 |
Length | 36 |
Molecular weight | 4531.0285 |
Aromaticity | 0.285714285714 |
Instability index | 87.6714285714 |
Isoelectric point | 8.68414306641 |
Runs | 6 |
Runs residual | 0.00968523002421 |
Runs probability | 0.0490932108578 |
Amino acid sequence | MYYNIRSCRRQHYNQYFSDYDFVCYRYSILSALYQ |
Secondary structure | LLLLHHHHHHHHHHHHHLLLLEEEEHHHHHHHHHL |
PRMN | - |
PiMo | - |