NONHSAT147801
Revision as of 03:24, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT147801 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
570 nt |
Genomic location |
chr16+:2649442..2651631 |
Exon number |
2 |
Exons |
2649442..2649507,2651128..2651631 |
Genome context |
|
Sequence |
000001 GATGTTCCCC AGGCCCTGCC TGTGGTTCCT GCCTGGGCCT TGGCTGCTGC TGTGTGAGAG CTGCATatgc ctggaagtgg 000080
000081 tattttgagg tgaaagagtt tgttcatttt gaagATATTT CTGTCTCTCT CTCGACCTGA TGTGTAGACG CTCACTTCCA 000160 000161 GTAGCAGAAC CACCTTAGTT GTGTCTTACA GATTCTGAAC AAATCGGTTT CTGATAAGCC ATGTGTTCCA AAGAATGTCT 000240 000241 GAATAAGACC GCTCTTTATT TAAATGCTAA GAGGATGTCA CTACTGCAAT CCATCTGTGG CCGATTTTTT CCAAGAGCCA 000320 000321 ATTTCCTTGT TTTGGTTGCA AGAACCTGGC TCTGCCTGCA TGTCAGCTCT CTGCCCTCCC TGCTGCCGTG GCTTTCAAGC 000400 000401 GCTTGGCAGA ATCTTGTACT TCGTGTCCAC AATGGTACTG AATTTGCATC TGCACAGTCA GCAGAGATAA CAAGTGTTGA 000480 000481 ACTGACCTTG CCACATGCTT AGTGAGTGAT TTGTAATTAA GTTTATAGAC TCAGAAGGTA TATTAGGACA TTTGGAATCA 000560 000561 GTAGCAGAGC |
Predicted Small Protein
Name | NONHSAT147801_smProtein_263:469 |
Length | 69 |
Molecular weight | 7721.0004 |
Aromaticity | 0.117647058824 |
Instability index | 70.2044117647 |
Isoelectric point | 7.63287353516 |
Runs | 10 |
Runs residual | 0.00655802861685 |
Runs probability | 0.0553347465114 |
Amino acid sequence | MLRGCHYCNPSVADFFQEPISLFWLQEPGSACMSALCPPCCRGFQALGRILYFVSTMVLN LHLHSQQR |
Secondary structure | LLLLLLLLLLLHHHHHLLLHHHHEELLLLLHHHLLLLLLLLHHHHHHHHHHHHHHHHHHH HHHLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL LLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTii iiiiiiii |