Lnc-CALHM3-2:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-CALHM3-2:1
Source	LNCipedia2.1
Same with	,
Classification	intronic(S)
Length	4533 nt
Genomic location	chr10-:105401922..105408105
Exon number	2
Exons	105401922..105406000,105407652..105408105
Genome context
Sequence	000001 TTAAACAAGA GCCATGAAAG CAATAGCTCT GGCGCTTAAA GAGAGGCTTG GTGCAGGGAT CTCAAAAGCC AAACATTGGA 000080 000081 GGGCTCCCCT GACCCCCACT GGTATCGGGG TAGGGATTTG CCTGACCCTT TTACTACCCC ATTTCTTCTT GTGTGCACTG 000160 000161 GGGAATCCTG TTTTTCCATA CTCTTTCTTG TCTACCTGGG CCCTTCTCAT CGCCTCACCT GTGTCGTGCC CACCAGCCCG 000240 000241 TGTCCTGGCA TTCTCTGAGT GCTTGCCATG CATCTTTCCT GCGTGGATAT GTGGGTGGGA AGGAAGTCGG GCAGGGATAG 000320 000321 CAAAGAAGTG GCTAGCACGT TGGAGCAGAC CTTAACCAGC TCCTGAAGAT AACAGAATAG GAGATTCTCA TCCCTCCGGG 000400 000401 CTCCAACCCA CCCCTAGGGG ACCCTCTTCT CCTCCCCTCC CCCTGCCTTA ACCAGTGAGA GAACCTAATC CTAGGTCACC 000480 000481 ACAAACCTAG CTGAGGCCCC AGGATGGTTA TCCCAGGACA AGGGGATTTA GGGCTCAAGT TAGACCCATT TGCTGCTTTC 000560 000561 TGGAGACTTA ATATCAGAAA CCGATGAAAC TGATGGGAAA GACAAGAAAG AGATTATTAA AGCACCTCCT ATATGTCAGG 000640 000641 CAGGGAACGA AACACCTTTT TTCTTATAAT TATCACCACT GCCCTGTAAA GTATGGGTAT TGTGATGCCT ATTTTACAGT 000720 000721 TAAGAAGGCC AAGGGCCAGA CGGTTCAGGT CATCCACAGT TCTCCCCTGT ACACTCTGCT GCCTCTTGGT GAATCCACTG 000800 000801 GAGGCTTGTG CCATGGTTGT GGAGCTATTT TTGGTATGCC TCTCTCCCCA CTGTCCTCTG GGAGTTGGGG CAAACAGGTC 000880 000881 TCTGGGGCTG CCCATTCCAG TGCCCTGAGT TGCACCCAGG AGGACTTTGT TTGTGGTCCC TGGATGAGAG GCAGTGCCAC 000960 000961 CAAGATTCCC AGTAGAGGCC TGCAAACAAC CTGTGGGGCT GCCTTGAATG GGCTTGGGAG ATGCTGCTAG TGGCACCCCC 001040 001041 TGCATTCCTC CAGGAATGTC GGCCCGTTCC TGGTGATTAG CCTGTGGGGC CTCCCTGAGC TTTGATCTTC CATTCCTGTA 001120 001121 AGCGGAGAGG CCCAGATGGA AATGGCCGGG TCAGGTATCC AAGCAGACTA CATGAGCTGT CAGGACTGGA AGTATTAGCT 001200 001201 CACTGGATGA TCCTGGGCAA ATTATGCAAC AAGCAACAAA AACCTCTGTG CCTTGGGTCC TTGAAGACAG ATCCTCCTGG 001280 001281 GTAAGCTAGA GATGCTTGCT GTGGGTCGAA GTCATTTCCC CAAATTGGGG AACTGGAAGA AGGAACATTG CCCAGAGGCT 001360 001361 GAGTCACCGC ACAGGATTCT AGCAGAGCAG AAGTTGCGGG GGCCGGCAGG AAGACAGCTG GAGAGAAGAT GCCCAGTGCT 001440 001441 GATCCCGCAT TGGCCCCAGG AGCTGGGCTT CAGAGAGTCT GAGCTTGTCA GGATGCCAAG ATGAGCAAGA TTCGGCCTAT 001520 001521 GTCCTCAGAG AGCTCTTGGT CTAGCTGGGG GACTGGCCAA CCCAAACCTA AGGTCAAGGT GATGGGGGAG CCTTGAGTTA 001600 001601 GGAGAGCAGA ACGCTGGCTG GCAGGGGAGT CAGGGGAACA TCACAAAGTT AGTGGCTTTG AAGGACGGGG CCTGGGTACT 001680 001681 ACAGCAATGA ATCAAAGACA TCAACACATT TGGGGGCTTC TGAACCCTGC TGCATGTGCA TTCAAAAAGC AAGACGGGGT 001760 001761 ACTTCTCCCA GGCCCCAAGA AAGGCTTCGA ATCCTACTCT GCCACTGAAT AGCCACTCTG TGGCCAGCAT GTGGCCATTC 001840 001841 TGCTCCTCAG TTTCCATATC TGTAACATGA GGATAATATT GGAAACCCAT GTGGCTATTG GGAAAGGCCA GCTGTGAAAG 001920 001921 AAAATTGTCA AGTGGCATAT TCACCCTCCT ATCCTTTTCT CTGATGGACA GGGATGGGCT ACCATCCAGT TTAGGCAGTA 002000 002001 AGTTCTACTG GGGATAGTTA GGAGTCCGTC GGGTTTCTGA AATGGCTTAG AATAGTAACC CCTCTGCCCC CACCAGCCTA 002080 002081 TAGCCTGGAG ACTTTTTTTT TTTTTTTTTT TGAGACTTGG TCTCACTCTG TCGCCCAGGC TAGAGTACAG TGGCATGATC 002160 002161 ACGGCTCATT GCAGCTATGA CCTCCTGGGC TCAAGTGATC CTCCCACCTC AGCCCCCGAG TAGCTGGGAC CACAGGTGCG 002240 002241 TACCACTATG CCCCGCTAAA TTTTTTAAAC TACATTTTTA GTAGAGACAA GGTTTCACCA TGTTTTCCAG GCTGGTCTTG 002320 002321 AACACCTGGA CTCAAACGAT CTGCCCACCT CGGCCTCCCA AAGTGCTGGG ATTACAGGTG TGAGCCACCG CACCTGGCCT 002400 002401 ATCCTTTTCA AAGCATTTTT CTCATCTATT ATCTCAGAGT AACTCTCTAA GGGTAAGTAG GGCAGGTGGC TTTGTTTCCA 002480 002481 TTTTTCAAAG GAAACAGTTG AGACCTCAGA GCTTGCTTGT GGCCAGGCTT GGATTTGAAC CAAGGTTCGG CAGATTCTTT 002560 002561 TTTTTTTTTT TTTTTTTTTT TTGGGATGGA GCCTCGCTCT GTCGCCCAGG CTGGAGTGCA GTGGTGCAAT CTCAGCCCAC 002640 002641 TGCAAGCTCC ATGTCCGTGG TTCACACCAT TCTCTTACCT CAGCCTCCCC AGTAGCTGGG ACTACAGGTG GAGGCCACCA 002720 002721 CGCCCTGCTA ATTTTTTTTT GTATTTTTTA GTAGAGATGG GGTTTCACCC TGTTAGCCAG GATAGTCTCG ATCTCCTGAC 002800 002801 CTCGTGATCC GCCCGCCTCG GCCTCCCAAA GTGCTGGGAT TACAGGCGTG AGCCACCGCG CCTGGCCTGG TCTGCAGATT 002880 002881 CTTTACCCCA AGCTTCACCT GAAGAAGATC AGTGGTTCCC CGAGAGTGGG TCGTGCAAAC ATGTGCTGGG CGGACACAGC 002960 002961 ATTGAGTGGC ATTGAATCTC GTCATGAGAA GTTTCTTTCC TTTCAGTTCT CTTTCACTCC ACATTGGGTC AAGGGGAGAA 003040 003041 TCTCCATTTG GGGCTCCTGT GCTGTTAACA TCTGTCAGAC GCTGGCTGAT GTCATTTGTT TGTTTGACCA AGAGCAAATC 003120 003121 TGACCCAGGC TTAGAATCTT GCTAGAACTT GCCTTGCTCT CTTGTTGAAC TTCATGGCAT TGTTTCATTG TATGTGTTTT 003200 003201 TCCGGAATCT CCCGTCTATA CCTAGGAATG CTGGTTTTCC ATCCACTGTA GCATAGGAAA ATGTCTTTTT GAAATACATG 003280 003281 TTTAAGTTTT AAAAAATAAA GTCAACTTAA ATAAACACAC TAAGATGACA CTAGTGTAGG TGTTACTCAG GTTCATTGGT 003360 003361 TCACCTGGCC GGAGGGCTTG GGGAATGCAG AGTTAAACGA CCCCAAGTGG GACTCTGTCT CTTAGGCACC TAGGGTGCCC 003440 003441 TCTGCCTCTT GTCTCCTAGG GTGACACCAG TGGCTCCCAA ATTCCAACTG GGAAAGGAGC CTGGAAAAGC ATCGGCATTC 003520 003521 GTGGTGGCTG CTCCCCACAC CAAGTAGAAG AATCCACGTT GTCAGAGAGC TGCTAACGTC AGGCGGTACT GGATTTTTGC 003600 003601 AAGCCCTCTA TTTAAAATTC CCCAGAAATT AAATAAGGAG GCTTTGGAGG GAGGAATGCC CTAGACAAAT TGTGGAGTGG 003680 003681 GTTTGTTTTG TTTATGGAGA TGGTCTTTAA AGTCTAAATT GTCCCCGTTT TATTTTTGCC CAATTGAAGA GGGGCTGAAC 003760 003761 TCAGCTGGGA GGGAGGGGAT GGTTGTCAGC CTACAGCTTT TAGTTGAAAC CAAGTCCATT CTGGGGCCAA GAAGCTTCCA 003840 003841 TTTTTAGCAA AGAGAGAAAG GGGAAAAATA TACAAACTCG TACATGTACG CATCTTAGGC ACTGGAGTAA GCCAGTTAAA 003920 003921 TGGATAAGGA TAATCTTTAT ATTTCAAGTG ACCACAGCTC TCTTCTCCAG GCTGCAAATA GATCTATTAA GCACCAGGCA 004000 004001 CATTTCTGGG CACTTTCCAT TCTTTTCTTT TCTTTTCTTT TTCTCCCCAC AACACTGGTA GTAAATACAT GCTGTTTCAT 004080 004081 ATTCCCATCT CACCAATGAG AACTTAAGCC TCATTCTTCA GTCTCTTCCT TCAGCCAATC TGAAGGACCA GGCACCACAC 004160 004161 TAGTCTGACG TTGGCTTCCT AAAGCTGTAG TCCACCCAAC ACCATGATAC AGGGGAGGAT CTTAGGTGGC AGAGAGGCAA 004240 004241 TATCAATCCT TCTGCATCAC ACAGTGGGAA AAGTTTGTCT CATTGCAGTT CTCTTCCAAG CCTTCTGACT TATCTCAGTT 004320 004321 TGATGTTCGA TGATCTTTAA CCCCTGTCTA GCAAATCTGT GTAGCAAAGA AAGAGCGGGC CACAGGCTCA GCCTCTTCAT 004400 004401 TTGTGGCACG GTTCAAATGT ACTACATAGC TTTGTTTTCA TCGTGTGTGC TTTTCTGGTT GGAGCCAGTG GTCCTCGTTG 004480 004481 TTTATTCATG GTGGCAATCT GAAGTTTCCT TAGCAAATTT CTTTCTTGAA GTT

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