Lnc-GRHL2-9:1
Revision as of 04:23, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-GRHL2-9:1 |
Source |
LNCipedia2.1 |
Same with |
, |
Classification |
intergenic |
Length |
8319 nt |
Genomic location |
chr8+:102019205..102029741 |
Exon number |
3 |
Exons |
102019205..102021354,102021531..102023783,102025826..102029741 |
Genome context |
|
Sequence |
000001 TTTCAAATTG TTTTTCAAAA CACAGGGTAA CATCCTAATA AACAAATGAA TCATGCTTCC TGCAACACCT TTTCACAAAC 000080 000081 AGAAACCCCA AAATATGCCT GCAATGTTCT GACAAAAAAA GAGGCCATTG TCCAATTAGC AAAACACCTG AATTTATTCA 000160 000161 GAGTGAGGGA GGAATCCAGC AACTGCTTGG ATGTTACCTG GAGAGAAGGC TGTGGGAAAC ATCACTCGTT GCAGGCTCCG 000240 000241 TTTAGCCTGT GTGAGGCCTT CAGCAAGATG CAACCTGCCC TGACCCATCA AGCATGGTTC TGCTCACCAT GCCACCGAGA 000320 000321 TCCAGCAGGC TCCTTGGCAA TGAGAAGATG CAACTGTGTT AGTTGTGGTC TCCTGCAGAA GGACTGGCCC CCACCACAAA 000400 000401 CATAAACCCT GCATTGAGCC TGAGTTATTG TCCTGGTGCT GAGAGCAAAA TTAATTGTTT GAAAAAAAAA GTGCTTTCTA 000480 000481 ATAAACTAAG AGGAAAGTGA TGCCATCCCA TATCTTGCTA CCCAGCTGGG TGGGGACTTT GTAAGCTGTC AGCACCAATA 000560 000561 TGGGAGACGT GGGATGGAAA ATAGCCCAGG CCAAGGTCAG ATACAGACAA GAACAGAGGC AAGTCTCCAA GCCTGGGATG 000640 000641 TGGAGCTGTC AGCACTACAG GGCATCGGGC AAGCTCAGGA TGGAGTCAAC AGCTGGAGAT GCCAAGTTGG AGCAGGGGCA 000720 000721 TTCCATGGGC ATCCAAGAGT TGAGCTGGCA GGATGGGGAA TGGGGCCAGC AGAGAATAAG GGCGTGCTCC CCTCTTCCTT 000800 000801 TGCCTGATTC ACCACTACTT ATCTTTTATA CCTTGGCTCA GACATCATTT TATCTCAAAG AAGGCCATCA TCCTGCAATT 000880 000881 CTCCTCAATA GCACCTACCA TTGAAGTGAG TCAATGGGTG ACTGATTTTG GAGTCCTGCC TGCTAGAACA TAAACTCCAC 000960 000961 GAGCTAGACC CCCATCTGTC TTCTTTATGG CCACATCTCT GGTACCCAGC ACCATGTGTG ACCCATTGTC AGCCCTCAAT 001040 001041 ACATCTTACT GGGAGGAAGG AAAGATGAAT AAAGGGCACA GAAGAAGAAG GAGGTAGGGA GGAAGGATGG GAAGGACAAA 001120 001121 TCGGAAGAAG GTGCACACTA AGCTGTGTCT GGTTCCAGAT CCTGTTTCTA AGGAGCTGCT GGTGGGCTTG TAAATGCAGG 001200 001201 TGGGCGTGGC CGACCCTGAA GGCATAGCAC CCCCAGCCCA GTGACTGACC TGTGTGGTAG ACATTGGAGG TCACATGGTT 001280 001281 TAAGAACCTG GCACATAAAT CCTTCCTGGA AAAATAATCA CATTGTATTT CTTGGTGTTT CATCTCCTGA CAGGGGTTTT 001360 001361 TCTTTCTCTG GTGTTTGAGA TGAAAACAAG CTGTGACCTG AAACTATAGA CACTTCTCAA GGATGATGGT ATGTTGATAG 001440 001441 AATGTAGTTA AAATGCTCAT TAGGGATCAT CTACTATTGT AAAGAACAGG GTAGAGGAAG AGTAGGGTAG GCAGAGTCTC 001520 001521 TTAATCCTTG GATTTATTCA ACAGGATTTT ACCAAAACAG GATGAACCTC TGAAAAAAGA CAAGCATTTA CAATAACATT 001600 001601 GTAAATAAAA CCTAATGAAA GACATCTGAA GTCTACAGAC AAATGAACAG CCTTAAGAAG CCTGAATCTT ACAGGCAATG 001680 001681 ACCTTTGCCA ATAGCTTTAA TACCAATAGA GTTGCTGATA TTGATTATCC AATCTGTGGC AGGTAGGAGT CCAGGAGTGC 001760 001761 AAAGGCACTT GGGACAGTGG GTTTGGGAAT ATTAGCTGGG TGAGAGGAAG CAGTGGTCCT GAAACTTAAT GTTCCTATGA 001840 001841 TTTAACTGGG GCTGAGTAGG TCTGAGATGG GGCCTTAGAT TTTGCTTTTT TAACAAGCAA TGTCTATGCA GGTGAGTATT 001920 001921 AAGAATAAAC TTAAACAGTT TTTCCTCTGC TCTCACACTA ACACAACAAC AGTTATCAAC ACAGACAGGA GAATTCTGTT 002000 002001 ATCCCCAAAT ATGAGGGGGT TTCTCCCCAT CAGCAAGCAG CCCATCAGTT CTGCAGTGGA CACCAGCTGG TTGCCCTCCG 002080 002081 ATTCAATTCT GACATCGTCT ACTGGAAGAT AGTGTCAGAT CCCACAGGTC TGACTCTACA GAGACCACAG ATTCTTTGAG 002160 002161 TTGCAAGGAA TGAAGAGGTC ACTCAACCTA GTTCAAGCGA TGAGGTTTAT GGTGAAGAAA TTGCAAAGCA GTGAGAGTGA 002240 002241 TGGAAACTTC TGGAAAACAG GATTGTGGAG TAGCCAGGCC TGGAAGAGAC TGGAACCAGG TATCATCCTG AGTCCAGGGC 002320 002321 AGCTCAAGGC ACCTCAGGGG CAGAGGTTTG TGTAATTCTT TATTTCTTGC TGTTCTTCGA AGGGCTTTCT TTTATCTCAG 002400 002401 AGCTTCCACT ACCCCATGCT TCTCCTAACT TCTGCCAGCT CGCCGCCTCT CAGAGCCCCT CGTCTGACTC AAAGTCTCTG 002480 002481 TTTCTGCTTC CTTTCAGCAT TTTCCCCACT GAAGACAGGA CCCTTGCTAG TTTCTAATTC AGGCCTCAAG AGCAAGAAGC 002560 002561 TGACCCGCCC CTCCTGGCAG GCAAAGCACA TCACCCAGGC GCCCCAGGGC CCTGCCAGCC TGCAACCAAG CTTCTTAGTC 002640 002641 AGGCTAGGTG TGCCCCAGCT TTCTAAACAC CTGGGGCCAG GAAGGGGCAG GATGGGCCTC ATGGTACAAC CTCGCTGCCA 002720 002721 GGACAGCAGG TGCTGCCTCC TGGGAAGGGC CTTTTAAAGA TATGGTGGGT GTGGTATTTG CCTCCTCTGT GAAATCCACG 002800 002801 GCTGGCTGAG CTCCAAGCTT TGTAGTCCTT GGAGAGTTAA TCTTGGTGGC TCTCTCTTAT GCAAAAAAAA ACTTCAGAGA 002880 002881 AGTATTGGGA GACTTCCTAT TTGGAAATTT CTAGTCTGTA CTGCTAAAGG GAGTAGGGGT AGGGGAGTCA TTTTTCAGTT 002960 002961 TTTTTTCTTT TTCTTTTTTT TTTTTTTTTA GGCAGGGTCT TGCCTTGTTG CCCAGGCTGG AGTGCAGTGA TGCAATCACG 003040 003041 GCTCACTGCA GCTCGACCTC GCAGGCTCAA GCGATCCTCC TGAATAGCTG GGACCACAGG TGTGCATCAC CACACCTGGC 003120 003121 TAATTATTTT GTAGTTTTTG TAGAGATGGG GTCTCACCTT ATTGCCCAGG CTGATCTCAA ACTCCTGGGC TCAAGTGATG 003200 003201 CTCCCTCCTT TGCCTCCCAA AGTGCTGGGA TTACCCATGA GCCACAGCAC CTGGCCCATT TTTCAGTTTT TAAAGGTCTG 003280 003281 GTGGTTTTCC GAAACCTTCA CTTGGGATTT GGCATGTTAA TTACGACTAA ACCCCTGATC CTTCCCCACA CCTCCTGGGG 003360 003361 GATGATTAGG TCAGGGCCAG GCCATCCCCG CTCCTCCTGG AGGCTGCAGG AGGCACTCCA CACATCTCCC CACGGGCAGC 003440 003441 ATCTGCTCAC TCCCTCTGCT CATGTTTATT GAGCACTCGA TGTGCTAGGT ACAGTTCTCA GACCTGGGGG TACAATACTG 003520 003521 AACCCAAAAG ACAACCGTCT CTGTCCTCAT AGAGCTTATG TTCTAATGAG GAGAGACAAT TCATAAATAT AACAAATGTG 003600 003601 TGAATTATAG CTTCCGTTAG AAGGTGATAA GTGCTTCAGG AAAAGAAAAT ATGTCAGAGT AAGTGGGGTA GGAAGTGCGG 003680 003681 GTGAGGAGAG GAGGTAGACA GATGAAATGT TTGATAGCAC AGGGAGGGTA AGTCATTGAG AAGCTGTTAT TTGAGCCAAG 003760 003761 CCTCGATGGA GGTGCGGGAA GCTTTGAGAA TTTTGTAATA TCCCCCAGCA CAAGACACTA GAGGCACCTT GGAGTCTTGT 003840 003841 GAAAGCAACA CTGAAAACTC TGGGAATAAA CAGCAGAGAA GTAAGGGTGT GACAAGTCAG GAATATTCCA TGGCTATGCA 003920 003921 CCAAGAATGG CCCTGCACAA ATATTTAGGA GGAGTGGCAG TGAGAGGATT TGAGGGTCAA AAGTGTTAAA GTAGAAATAT 004000 004001 GAGAAATTAC AACAAAGTCC AGGTTCACTT CAGTGTATTA TTATTTTCAT TTTTTTGTAA AATATTTTGA AAAATTTCAA 004080 004081 AATAAAGTTG CTAAAAGACT TTGTCGTGAT AATGACGTTG CAGTTATGTA GGAGAATGGC CTTATTCTTT TTTGTTTTGT 004160 004161 TTTGTTTTTG AGACTGAGTC TTGCTGCGTC ACCCAGGCTG GAGTGCGGTG GCACAGTCAT GGCTCACTGA AGCCTTGACC 004240 004241 TCCCAGACTC AAGTGAACCT CCCGCCTTAG CTTCCTGAGT AGCTGGGTGT ACAGGCAAGT GCCATCATAC CCAGCTAATT 004320 004321 TTAAGATTTT TTGTAGAGAT GGGGTCTCGC CTTGTTGTCC AGGCTCCTTG AACTCCTGGA CACAAGTGAA CCTCCCGCCT 004400 004401 CAGCCTCCTG AGTAGCTGGG ATTACAGGTG CATGCCACCA CGCCCGGCTA ATTTTTTGTA TTTTTAGTAG AGATGGGGTT 004480 004481 TCACTGTGTT AGCCAGGATG GTCTCAATCT CCTGACCTCA TGATCCGCCC GCCTCAGCCT CCCAAAGTGC TGGGATTACA 004560 004561 GGCGTGAGCC ACCGTGCCTG GCCTTTTTTT TTTGTTTTTT TTGAGACGGA GTTTCGTTCT TGTTGCCCAA GCTGGAGTGC 004640 004641 AATGGCGCGA CCTCGGCTCA CTGCAACTTC CTCCTCCAGG GTTCAAGTGA TTCTCCTGCC TCAGCCTCCA GAGTAGCTGG 004720 004721 GATTACAGGC GCCCACCACC ATGCCTGGCT CATTTTTTGT ATTTTTAGTA GCAATGGGGT TTCACCATGT TGGCCAAGCT 004800 004801 GGTCTCGAAC TCCTGACCTC AGGTGATCCA CCCGCCTGGG CCTCCCAAAG TACTGGGATT ACAGGCATGA GCCACCGCAC 004880 004881 TTGGCCTGTT TTGTATTTTT TCTATGAGAC ATGCCTGGTG GTAGAGAGAT TTGGACTGGC TAACCTGTTT TTCTTTTGCT 004960 004961 GCCACTTTGT TTGGGTTCTA TCCAAAGCAA ACCTTGGGAT CAGAGTTTGA GTGTAAGCTG TTTATTTGGC AGATGTAGTG 005040 005041 GGTTGAATGG TGGCCCCTCA AAAGATATAT TCATGTCCTA ACCCCCGCAA CCTGTGAATG TTACATTATT TAGAAAAATA 005120 005121 GTTTATTGTC AATGTAATTA AGTTAAGGAT CTTGAGATGA GATTATCCTA GATTACCCAG GTGGGCCCTA AATCCCATGA 005200 005201 CAAATGTCCT TAGAAGAGAC AGAAGAGGAG AAGGCATGGA CACAGAGGAG GAGAAGGCCG TGTGAAGATG GAGGCAGAGA 005280 005281 TTACAGTGAT GCAGCCACAA GCCAAGGAAG CCTGGAGCCC CCAGAAGCCA GAAGAGGCAA AGAAGGATTC TCCCTAGAGC 005360 005361 CGTCAGAGTG AGTGCAGCCC TGCTGCCAAC TGGATTGTGA GCTTCTGGCC TCTAGAACTG CAAGGAAATT AATTTCTGTT 005440 005441 GTCTTAAGCC ACCAAGTTTG GGGTCATTTG TTAAGGCAGT CTTAGGAGAG GAATACAGCA AGTGATTCCA GGAAGCAGAG 005520 005521 GCATGGAGTG GGAAAGTGAG ACGCAGTGGG ATGCAAGCCA ATAAAGGGAA TGCTCAGGGG TGCATCGCTG CCCTGGGGAG 005600 005601 CTTCTGAGAG GAGTGAGAAG GCCGGGCTAT CCCCCAGCTC CATTCTTGCT GGTTGAGGGT CACTCCTTTG GGCTCAATGC 005680 005681 TCAATATACT CTTGGTCTGC AGAGCATGCT CCTAAGGTAT TGTGTGTAGG ATTTTGGAGT GGACCAAGGG CTCTGGACAG 005760 005761 AGTGGAGTGG ACAGCAGCTC CTCTGCCCCT ACCCTTTGGC TGCTCATTGA TTAGCTGAAA GCCCTACAGG CATAGGTATG 005840 005841 GGAAGAAAAA ATGAGGTTCA GTAGATAGAG AGTAACATAC TTTGACACCC AAAACAAATT AGACTGGTGG ACTCCAGTTA 005920 005921 GAATGTCCAA CTCCAAGACC TGATCAGTTC ATGTATCCAC CTCTGGCAAA TATGTGACAG GTGACTCCTT TCTGCACAGC 006000 006001 ATGGAAATAT TAATCCACTT TCTTTGGGAT ATTATAGTTG GAATATGAGT TTTTTTCAGG TTTATTTTAG AATATATTTG 006080 006081 ATAACTTCCT GTTTATTAAT ATTGAATGGA ATGTTCACAT GTTCCCATTA TATTTGTCTT ACATGTAAAA GCTCTATAAT 006160 006161 CGTGCATTAA ATCAACCTGC CTTGTAGTAT AAGCTAGAAA TGCTGCTAGA TGCTCTGTGT GGAGACTGGA TCTCCAATGA 006240 006241 CTCTGGCACC TCACAGCACC CAGCACAGTG TAAGAAAACA GCAGGTGCAC AATAAAGACA TGCTGTTAGG TTTATCCCTC 006320 006321 TCCTTCCTGG TCTCTCCTTC CAGCCCCTGG GCTCCATCAC AATCATTTCC AAGCAGTGCT CCTGCAGCTT TCATTTCTTG 006400 006401 CTCGTCTGTT ATTTGTTGCT CCCAGCCAGC AATGTTCTTT TCTTGTCTCT TTTCTTCTAG TCTCTCTGGG TAGATTCCTG 006480 006481 CAGTGCTTTT TGGCACGGCT GGGTGGGGAA CTCTCCGAGA CTGTCTACAT CATTTTTCAA AGCTCCCACC ATCAGACTTG 006560 006561 GCATTTCATA TACAGCTTTG AACACTGTCA ACTGGTGCCT TCACCTTTTC CCTTAATGAG GGCTCAAGGG TACCCTTTAG 006640 006641 CACAGAATAA ATGTACACAT CTGAAATTGA ACATTAAAAT GTATCTGCTT GTTTTAAAAC TCAGTTTTTC CTTTTCAGGT 006720 006721 TGGAGAACGT CTTGGAAATG GCATGCCTTT ACTTGTGGGT TTCCATTAGG GCCTCCTGGG TATGATCCTG GCTGTAGCCT 006800 006801 CCTTTTTTCT TAGCTATTTA TTTCTCTTAT GAGCTGGAAC TGAGAGGGAA GAGGATCCGG AGGACTAAGG TAGTTTTGTT 006880 006881 CCTAGCCATC TTTGGCTTGA ATCCTTTTGG CATCCTCTGA TAAGCAGAAA TAGCATCATC TGTCTCTACT AATGGCATTA 006960 006961 TCTTAGCTGG AAGAAGTGAT TTATTCAAAT GCTCTAATAA TTATAGCTCA CATCTATCGA GTGCTTACCA CACGCCAGGC 007040 007041 TCCTGTGCTA AGTGCTTGGC ATTCTTTATC TCCATTTTCA TCTTCACAAC AACCTTCTGA AGTTGCTCCT TTATCATCTC 007120 007121 CATTTCACAG ATGAGGAGAC CGAGACTTGG GAAGTCTAAG TGCATGCTGG AACCACACAG GTAGTGGAGC TAGGATTCAA 007200 007201 GCCCAGGTCT GTTTGACTTA GAACATGTGA CTTAGAACAT GTGAGTTAGA ACATGTTCTG AACACAACTT TCAGGGCACA 007280 007281 TGGCCTTGGA TCGCAAGACT CCCTCATCTT CTGCTTTTTA AAACAGTTAC ATGGAGAAGT GACTCCATGT TGAAAAGGCA 007360 007361 ACCACAGCTT CTGAAAGTGT CCTTAGGGAA CCTCACTATT AGGAGCCAGG TCTATCCAAG TCAGTACAAA TGAAGCGAGG 007440 007441 GATGCTGGCC AAGGCACAGG GTGGGCTTTT TCTGTTCAGG AAAACAAGGT TGTTTTTAAA AGGAGATTTG TTGAAAGGGA 007520 007521 CATTAGAAGG AGAGTGTGAA CACTTTGGAA TGTGGAGATG GACGGGGAGT AAGACCCAAG CATCTCACAC CATTTGGGGC 007600 007601 AGCATCAAAG CTTTTATGAG TGTCCTCTCC CATAGCAACT CGGCACCTCT GCTGGTTCCT GCCTCACCTG TCCTTCAGCT 007680 007681 TGTACCAAGT CATCCACTCA GGAGGCGGAA TTGTGCTTTG CTGTCATGAA ATCTCTATTG GGGAAGATCA ATGGAAAAAG 007760 007761 GACTACTCAG AAGACAGGGA TCAGCTCAAA CCATTCATTC CTGGTTTTCA TGGGGGTATG AGGAGAGCAG AGCAAAGTGT 007840 007841 GTGTGTGTGT GTGTGTGTGT GTGTCTGTGT GTCTGTTATT GTGTGTGTCT GTGTCTGTTA TTGTGTGTGT GTGTGTGTGT 007920 007921 GTGTGTTTGT AGATGGGGTC T |