Lnc-IRF1-1:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-IRF1-1:1
Source	LNCipedia2.1
Same with	NONHSAT103754
Classification	intergenic
Length	3733 nt
Genomic location	chr5-:131804579..131808735
Exon number	2
Exons	131804579..131807870,131808295..131808735
Genome context
Sequence	000001 GCTTTGCTTT TTTTTTTTTT TTTTTTTTTT TAAGAAAAAG GTTTTCTAGT TTCTTCTACA TTAAAAATAA TCCCTCCTTC 000080 000081 TCATAAAGCA CAATTTTACA GAGGAAAAGG GAGATGTGAA ACTATACACA ATTCAAATCT AATTAATATA TAATTTTTTT 000160 000161 GTGGAATACA GATGGAGGGA ATACATCACA ATACTAAAGG TGATTATCTT TGGATGGTGG GATTACAGGT GATTATATAT 000240 000241 TTTTTATATT TCTATAGTTT AAAAATATTC CATGATGACC TATAATTACT TTTACTTATT TTTTGAGACA AAATCTCACC 000320 000321 CTGTTGACCA AGGCTGGAGC GCAGTGGTGC AATCTCGGCT TAGTGCAATC TCGGTGTAGT CTCGACCTCA CAGGCTCAAG 000400 000401 TGATCCTCCC ACCTCAGCCT CCGGAGAAGC TGGGACTACA GCTCTTTGCC CAGCTTCCAG TGACTCCTCT GTGCCTGGAG 000480 000481 AGAAGGGCAA GCGCCTTACT CATGCCTTGA GGTTGCTGAC CACTTCCGTC ACCAGCCTCG CTCCTTCCAG ACCTGCCCTG 000560 000561 GGAGTCCCTG CCTCCTGGCC TTCACCTGCA TCACGGTCTG CACTTCTCAG AGCCCTGCCC TTCCTTGAAG AACAAAGCCT 000640 000641 GGCCAAATTG TGTCAGCCTT CTGGCCTGCA GTGACCCCTG CTTACATCGT ACATAACAAT AGCTATAACT TATTGACATT 000720 000721 AACTTCAGGT CACATAGCAA AAGTGCTCTC ATTTAAATCT TAGGCCACCA GAGGATCCAT AGACTAAAAT GTTAACAGCA 000800 000801 TCTCCTGGAG TTGTGGAGTG TGGTGACCCT ATGTGATCCT CCTGTGCCAC TGAGAGATAT ATTATTAACC CAGTTTCACT 000880 000881 GATAAGATAA CTGAGGCTCA GAGAGGTCAA GTAACTTGCC CATGGTCACA CAGTGGGTCC ATGGCAGAGC TGGGAGGTGA 000960 000961 TCCCTAGTCA GTTCCCTCCA AGTCCAGGAT TTTCTCACTC CCACAATGGT GTCTCCCTTA ATGACTCTCA CATTCCAGCC 001040 001041 TCTGAGGGCA GGAAGGGTAT GTTCTGAGTT GAACACACAG AGAGCACTCA ATGATGTCTG GTGGTGAAGA TGTTAATCAT 001120 001121 GAGCTCAATC AAGGTTTATC ATTAAATCAA CAAGTCTTCC TAGTGTGTCT GGGAGCTCTG GGGCCCAGGG ACAGGCCTAC 001200 001201 TGTAGTTCAG TGTTGTATTC TGGCACCTGG TGGTTTCTGG CACATAGCCC ATGTTCATTA AATGACATGA ATTGATTGTC 001280 001281 CATTCAAATA ATAAAACAAT AAATAAATAA TACTAGCTAA CAGGTATGGA GTGCCTACAA GCCAGCCACC TCAGGGAGTT 001360 001361 TCCAGGACAG TTGAGGAGAA ACATAACACT GTTGACAAGA GCTACAACGT AGGGTTTTAC ACCAAAACAG TGTCTACGTA 001440 001441 AACAGTGTCT ATCAAAGAGA GAAAAATGAT GGGCAGACAC CCTGATCCTT CCCACAGTGC TAAAGGCCAT GCCAGCCACT 001520 001521 GTCCCCATTA CGACTTGCAT ATACTGACTG CCGAAGCACA CAAACCTGAA TTTTCCGTCT GCATCCATCG TTCTGTCTGT 001600 001601 TCGGATCACA TCTGGATACT ACTGTTGCCT CTCCAGACTG GATAACCAGT CTGCTGAGGG CCAGAAGATG GTGAGATGGA 001680 001681 AACTAGTCAT GTTTACTTGG AGAAGAGAAA TGAAGACCGT CTTTAACACC TGACAGGTTG CTCTTCCCAA GAGGGGCCAG 001760 001761 AGGGCAACAG CCATGGTCAA CAGCTCCAGG CACCCCTGAG GAAGCCTGCT CCAGCTGGCA GGGCTGTCTG GCAAGGGACC 001840 001841 AGTCCCTCCT CTGGAGAAGT GGTGAGCCCA GTGGGCTGCC TCTCCAGCAG GATCCTGTAG AGACCTTACT CTCTACAATG 001920 001921 CACACTCCAC ACACTTGCTC ACTTGACAAA CACTTATTAT AACTGTCACC CTGGGCCCAT TCCAGGTTAG GGACATAAGG 002000 002001 ATGAATAAAA CAAGGTCTGT ACCAGTAGAG AACATCAGTC CTCTAGGGGA GAAAGTCAGG AAAGCCTCAT CCTGAGCCTT 002080 002081 CGACTCCTTA CTGTCCATCC TCTAGGCTCC TGTCTCAGCT TCTGCTGAAG GCTATTTTCT TCCTTGTATT CTGCAGTGAC 002160 002161 CAGGCATATG GCAGATAATC AACAAATACA GGCATCCCTG AAGAGGGTAT CCTGGGATAA AAGCCCCAGC TGGATCAGTG 002240 002241 CTATACAGGG GCCAACTGGG GGTGGGTTCC AGGCAGGGTC ATTTGCAAGG GTCCCTCTGC CCCTTCAAGT CCTGCCAGAC 002320 002321 AGGCCTTGGC CATGGTTTCT TCCTGCCCCT GTCCCCTGAC CACAGTTGAT CTCCCCTGGC TGTTATGAAA TGTCAAAGAA 002400 002401 TGTCCTGCAA TCCTAAATTC CATAATGATC TTTATCTTCT GTTCCCTCTG AGGCTCCTCA ATCTGCAGTA ACAGCTGTGG 002480 002481 TTCAGCAAGC AGTGCGGCAC TCTGGAGTGC TGTTCTGAAA CAGGGCCGGC GTGGGGCAGA GCTCATCTGC TGCCCTATCC 002560 002561 ATTCACTGTG CTGTTCGGGG CTAGAGAAGA TTCATGTGTG TATATGCTTT TTAAAAATTG TGAAACAATA ATTATGCAGA 002640 002641 AAAATACATA GAATATATGT TCAGTTTAAC AAATAATCAT AAAGCAAATC TCTATAAAAC CACTGCTGCT CTGCAGTGAC 002720 002721 CCCTGCTTCC CCCTAAGTCG TGCATAACAA TAGCTACAAT TTACTGACCA TGAACTTCAG GTCACACAGC AAAGGTGTTC 002800 002801 TCATTTAATC TTTGGCCACC AGAGGCTGCA TAGACTAAAA TGTGAACAGT GTCCCCTGCA GTTGTGGAGT GTGGTGACCC 002880 002881 TATTGGATCT TCTCATGCCA CTGAGGGATA TACTGTTTTC TGTAGAGAAG TCCAGCAGAG TCACTGTCCT GGGGGGCATC 002960 002961 CTTCTTGATC GCCCCCATGC CATGAAGGCC CATTCCTTGC CCAGGGCTCT AGAGTCTGAG CTTCTCCAAG AGGGAATGGA 003040 003041 GTCTTTCGCA GAGGGGCTGT GGAGCCTCGT AAGGCTGAAT CTAACCACGA GCAGGGATTT TGGGCAGCTG CATATCCCAG 003120 003121 ATGGTTTCCC AGTGGATCAG CTTCCTGTTG CTGCTCTAAT AAACTAACAT AAACTTAGGG GCTTAAAACA ACACAAATTT 003200 003201 CTTTTCTTAT AGTTCCGTAG GTCAGAAGTC CAAAACAGGT CTCACTGGGC TAAACTGAAG GTGTCAGCAG GGCTGCATTC 003280 003281 CTTCCTGGGG GCTCTAGTAG AGAATCTCTT TCCTTTCTTC CCCTTTCCAG CTTTTAGAGG CTGCCTGCAT TCCTTGGCCT 003360 003361 GCGGCCCCTT CCTCCACCTT CAAAGCCAGC ACTGGCTGGC CAGGTCTTTC ATATATTGCA ATCTCTCTGC TTCTGCTTCT 003440 003441 GCTTCTGACC CTTCTGCCTC TCTCTTCTCC ATTTAAGAAT GCTTGTGATT ACATTGGGCT CACCCACCCC AGTTTCTACC 003520 003521 CAATAATCCA GGGTAATCTC CCAAACTTAA AGAGAGAAAA CAATACTAGC ACCCCCAAAG CACCTACGTG TTCCCCTACT 003600 003601 AATCACAACC CCAACCCTCC CTTCTGCATA AGTAGACATT TGTAATAATT CTGTGCTTTT TGTAGTTTGA CCTCCTCTGC 003680 003681 ATGTATCCTT AACAATACAG TTTTGCCAGC TGTTAAATTT TTGCTAAAAG GAA

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