Lnc-IRX2-3:3

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-IRX2-3:3

Source

LNCipedia2.1

Same with

NONHSAT100125

Classification

intergenic

Length

1467 nt

Genomic location

chr5-:3418732..3532059

Exon number

4

Exons

3418732..3419430,3421185..3421418,3422396..3422736,3531867..3532059

Genome context

Sequence
000001 TTTGGAGTCT CTTTTGGAAA AAATACGAAA CAAATAAAGC CAGTTTCATT TTCAACTTCT ATTTCAGCTG CTACACTGAA 000080
000081 GGGAAAAACC TGAGGAAGCC CCTGACCTTC TTGAATAACC TGGATATTGC AGAATCATGC CTGGCACACG GCACTGGCAG 000160
000161 AGACGCAGAA GGGAAAGTGT CCAGCGATGA GAGATACCGG CCAGGGGGCA AATCTTCAGC TTGCAGCACT CACTTTGCAG 000240
000241 ATCCAGTTGG AATTATTTGT GTTGACGCTC TCTGCTCTCT CCGCTCTCCC CTGGAAATGA CGAGGAACTG AGTACAGTGG 000320
000321 ACAATGGCTT CCGTGTCCCT AGCTCCCCCC GAGCCATGAG CTGCTACATC AAAAGTCTGC AGTGGGCTGC CCTTCCCATA 000400
000401 ATATTTCAAT TTAAGCACCG ACTTGCTGCT GCGGAGTCAT ATCTCATTCA TGCTGCAGCC TTTGCAGGAG TCAGGGATCA 000480
000481 TTATGGAGCA AGCACTGAGA AAAAACAGAT TACAGCTTGG CACCGAGCAG CCAGGTTGCA CCCCAGATGC TTCAGGGACA 000560
000561 TGGTGCCTGC TCTGGAGAAT GGGGCAGCTT CCACACTGCC CAGGAGCCAG GGCTTCTGAC CCAGGAGCGA AAGTCTGTCT 000640
000641 CTTCCATTTC TGGGAGCTGG CAGTATTTGC ACGACTTTCT GGGCCTCAGG CATCCCATTG CCCACCAGGA ATTACCTTCC 000720
000721 TCCAGGATCA TGGTGAAGAT GACATGAGAT GCTAATGCTT GGCCTGCGGT TGCTATTTTT AGTTCTCCAC TTTCCTGGAA 000800
000801 AGCATGCAGT TGAAGTTCAT GACGGTATTC TCTCAACGTG TGACTCAAAG ACAGAGGCCG TTTCCCATCC ACCGGTTCTC 000880
000881 ACACTGCCCC ATTCTGCAGC TTCACCATCC ACGCGCTAAG AAGGCAGGCC CCAAAGTCTC AGCACCCAGC CGCTGGGGTC 000960
000961 CTCGCTCTTA TGGACAGAAA ACTCAAGAAT GAATATGTTT CCCCATCTTG TGCCCTTTTG CCTGGAAACT ATACAGAGCA 001040
001041 GGGGTCCCTG CTGGCATTCC TTCTCTGTAC TAGTACGGCT TCGGAAAGTA CTGGTTCTCT GAGGAGCGCT CAGTTGCATC 001120
001121 TGGAAGGTGC AGTGTGCACA GCGATGCCCC TTGACACCAA GGTGTGAGCA TTTGAGCTGT GCTGGAAGGT TCTCCATGGA 001200
001201 ATAGTGCCCA CCCTGGAGGG TCCTGTGCCG CGCACTTGAG GAGGCTGTGG TGGTGAGGAG AGACTCTGGA GCAACCCACA 001280
001281 CTCCCGATAA GTCAGATAAG AGTGCCTCCT CTAGGTAAGT TTATGTTGCA AATTTAAAGA GAGGAACCAA GAAACAGCAA 001360
001361 GGACACTGAG CCAGGACTGA GAGTTTGGGT CTTAGGTGGC TTTGGGTCAT TACGCCCTCT CAAGTGGATT GCTCTAAGCC 001440
001441 CTGTTTATTT GTTAATGTGA ATAGTTG
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