Lnc-SPATA21-2:4

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-SPATA21-2:4
Source	LNCipedia2.1
Same with	,
Classification	sense
Length	4295 nt
Genomic location	chr1-:16888818..16931427
Exon number	18
Exons	16888818..16890681,16892903..16892954,16893674..16893846,16894474..16894528,16895571..16895731,16899637..16899688,16900982..16901187,16907915..16907987,16909039..16909253,16910089..16910191,16911984..16912193,16913545..16913756,16914220..16914292,16915344..16915558,16918342..16918551,16918654..16918808,16930736..16930859,16931286..16931427
Genome context
Sequence	000001 CCCTTGAAGA TAAGGATGGT CAAACAAAAT AATATTATAT CTGCAGAAAG TCAGATCTTG GTAAGATTTA CTAGTTGGGA 000080 000081 ATCCAATGTT AATGCCAAGA AGCAGCTGCC AGTTGGGATC AAATGTGAGC CTATGGATCA AGGAATGCCT GGACACAGTA 000160 000161 GACAAAAGTT GTTCAACTGG ACGCCTTAGG ATACACGCTA CCAAAAACAA AGTAGCCAAA AAGGAACCAG AATAACAGAA 000240 000241 TATCAGAGCC AGAGGAACAT TTGGAGACGG TTACCTGGCA CGCTGGCCAC AGTCTACCTC ACTCTTATCA GAGTCTGAGC 000320 000321 TACTGGCAGT GCTTTCAGCT CTGAGTTCAG GCACCTCGAA CCTTGTTTTT GTGGTGAAGG ATCCTAAAGT GCTGTGGGGA 000400 000401 GTGATCACAT TTTTCACAAC ATCCCTGGCT CCACCTCTTC TGCCACAAAC GTCAGCATGG TGGTATCAGC TGGCCCTTGG 000480 000481 TCCAGCGAGA AGGCAGAGAC GAACATTTTA GAAATCAACG AGAAATTGCG CCCCCAGCTG GCAGAGAACA AACAGCAGTT 000560 000561 CAGAAACCTC AAAGAGAAAT GTTTTGTAAC TCAACTGGCC GGCTTCCTGG CCAACCGACA GAAGAAATAC AGCAATATAA 000640 000641 AGTCCTGGTT CACTCTCAGG AACGAGAGCT GACCCAGTTA AGGGAGAAGT TACGGGAAGG GAGAGATGCC TCCCGCTCAT 000720 000721 TGAATCAGCA TCTCCAGGCC CTCCTCACTC CGGATAAGCC AGACAAGTCC CAGGGGCAGG ACCTCCAAGA ACAGCTGGCT 000800 000801 GAGGGGTGTA GACTGGCACA GCAACTTTTC CAGAAGCTCA GCCCAGAAAA TGACGAAGAT GAGGATGAAG ATGTTCAAGT 000880 000881 TGAGGAGGCT GAGAAAGTAC TGGAATCATC TGCCCCCAGG GAGGTGCAGA AGGCTGAAGA AAGCAAAGTC CCTGAGGACT 000960 000961 CACTGGAGGA ATGTGCCATC ACTTGTTCAA ATAGCCACAG CCCTTGTGAC TCCAACCAGC CTCACAAGAA CATCAACATC 001040 001041 ACCTTTGAGG AAGACAAAGT CAACTCAACT CTGGTTGTAG ACAGAGAATC CTCTCATGAT GAATGTCAGG ATGCTGTAAA 001120 001121 CATTCTCCCA GTCCCTGGCC CCACCTCTTC TGCCACAAAC GTCAGCATGG TGGTATCAGC CGGCCCTTTG TCCAGCGAGA 001200 001201 AGGCAGAGAT GAACATTCTA GAAATCAACG AGAAATTGCA TCCCCAGCTG GCAGAGAAGA AACAGCAGTT CAGAAACCTC 001280 001281 AAAGAGAAAT GTTTTGTAAC TCAACTGGCC TGCTTCCTGG CCAACCAGCA GAACAAATAC AAATATGAAG AGTGCAAAGA 001360 001361 CCTCATAAAA TCTATGCTGA GGAATGAGCG ACAGTTCAAG GAGGAGAAGC TTGCAGAGCA GCTCAAGCAA GCTGAGGAGC 001440 001441 TCAGGCAATA TAAAGTCCTG GTTCACTCTC AGGAACGAGA GCTGACCCAG TTAAGGGAGA AGTTACGGGA AGGGAGAGAT 001520 001521 GCCTCCCGCT CATTGAATCA GCATCTCCAG GCCCTCCTCA CTCCGGATAA GCCAGACAAG TCCCAGGGGC AGGACCTCCA 001600 001601 AGAACAGCTG GCTGAGGGGT GTAGACTGGC ACAGCAACTT TTCCAGAAGC TCAGCCCAGA AAATGACGAA GATGAGGATG 001680 001681 AAGATGTTCA AGTTGAGGAG GCTGAGAAAG TACTGGAATC ATCTGCCCCC AGGGAGATGC CGAAGGCTGA AGAAAAGGAA 001760 001761 GTCCCTGAGG ACTCACTGGA GGAATGTGCC ATCACTTGTT CAAATAGCCA TGGCCCTTAT GACTCCAACC AGCCACATAG 001840 001841 GAAAACCAAA ATCACATTTG AGGAAGACAA AGTCGACTCA ACTCTCATTG GCTCATCCTC TCATGTTGAA TGGGAGGATG 001920 001921 CTGTACACAT TATCCCAGAA AATGAAAGTG ATGATGAGGA AGAGGAAGAA AAAGGGCCAG TGTCTCCCAG GAATCTGCAG 002000 002001 GAGTCTGAAG AGGAGGAAGT CCCCCAGGAG TCCTGGGATG AAGGTTATTC GACTCTCTCA ATTCCTCCTG AAATGTTGGC 002080 002081 CTCGTACAAG TCTTACAGCG GCACATTTCA CTCATTAGAG GAACAGCAAG TCTGCATGGC TGTTGACATA GCAGGACATC 002160 002161 GGTGGGATCA AGTGAAAAAG GAGGACCAAG AGGCAACAGG TCCCAGGCTC AGCAGGGAGC TGCTGGATGA GAAAGGGCCT 002240 002241 GAAGTCTTGC AGGACTCACT GGATAGATGT TATTCAACTC CTTCAGGTTA TCTTGAACTG ACTGACTCAT GCCAGCCCTA 002320 002321 CAGAAGTGCC TTTTACATAT TGGAGCAACA GCGTGTTGGC TGGGCTCTTG ACATGGATGA AATTGAAAAG TACCAAGAAG 002400 002401 TGGAAGAAGA CCAAGACCCA TCATGCCCCA GGCTCAGCGG CATGCTGATG GAAGTGGAAG AGCCTGAAGT CTTGCAGGAC 002480 002481 TCACTGGATA GATGTTATTC GACTCCGTCA ATGTACTTTG AACTACCTGA CTCATTCCAG CACTACAGAA GTGTGTTTTA 002560 002561 CTCATTTGAG GAACAGCACA TCAGCTTCGC CCTTGACGTG GACAATAGGT TTCTTACTTT GATGGGAACA AGTCTCCACC 002640 002641 TGGTCTTCCA GATGGGAGTC ATATTCCCAC AGTAAGCAGC CCTTACTAAG CCGAGAGATG TCATTCCTGC AGGCAGGACC 002720 002721 TATAGGCACG TGAAGATTTG AATGAAACTA TAGTTCCATT TGGAAGCCCA GACATAGGAT GGGTCAGTGG GCATGGCTCT 002800 002801 ATTCCTATTC TCAGACCATG CCAGTGGCAC CCTGTGCTCA GTCTGAAGAC AATGGACCCA AGTTAGGTGT GACACGTTCA 002880 002881 CATAACTGTG CAGCACATGC CGGGAGTGAT CAGTCAGACA TTTTAATTTG AACCACTTAT CTCTGGGTAG CTACAAAGTT 002960 002961 CCTCAGGGAT TTCATTTTGC AGTCATGTCT CTGAGCTTCT ATACCTGCTC AAGGTCAGTG TCATCTTTGT GTTTAGCTCA 003040 003041 TCCAAAGGTG TTACCCTGGT TTCAATGAAC CTAACCTCAT TCTTTGTATC TTCAGTGTTG AATTGTTTTA GCTGATCCAT 003120 003121 CTTTAACACA GGAGGGATCC TTGGCTGAGG ATTGTATTTC AGAACCACCA ACTGCTCTTG ACAATTGTTA ACCCGCTAGG 003200 003201 CTCCTTTGGT TAGAGAAGCC ACAGTCCTTC AGCCTCCAAT TGGTGTCAGT ACTTAGGAAG ACCACAGCTA GATGGACAAA 003280 003281 CAGCATTGGG AGGCCTTAGC CCTGCTCCTC TCGATTCCAT CCTGTAGAGA ACAGGAGTCA GGAGCCGCTG GCAGGAGACA 003360 003361 GCATGTCACC CAGGACTCTG CCGGTGCAGA ATATGAACAA CGCCATGTTC TTGCAGAAAA CGCTTAGCCT GAGTTTCATA 003440 003441 GGAGGTAATT ACCAGACAAC TGCAGAATGT AGAACACTGA GCAGGACAAC TGACCTGTCT CCTTCACATA GTCCATATCA 003520 003521 CCACAAATCA CACAACAAAA AGGAGAAGAG ATATTTTGGG TTCAAAAAAA GTAAAAAGAT AATATAGCTG CATTTCTTTA 003600 003601 GTTATTTTGA ACCCCAAATA TTTCCTCATC TTTTTGTTGT TGTCATTGAT GGTGGTGACA TGGACTTGTT TATAGAGGAC 003680 003681 AGGTCAGCTC TCTGGCTCAA TGATCTACAT TCTGAAGTTG TCTGAAAATG TCTTCATGAT TAAATTCAGC CTAAACGTTT 003760 003761 TGCCGGGAAC ACTGCAGAGA CAATGCTGTG AGTTTCCAAC CTTAGCCCAT CTGCGGGCAG AGAAGGTCTA GTTTGTCCAT 003840 003841 CAGCATTATC ATGATATCAG GACTGGTTAC TTGGTTAAGG AGGGGTCTAG GAGATCTGTC CCTTTTAGAG ACACCTTACT 003920 003921 TATAATGAAG TATTTGGGAG GGTGGTTTTC AAAATTAGAA ATGTCCTGTA TTCCAATGAT CATCCTGTAA ACATTTTATC 004000 004001 ATTTATTAAT CATCCCTGCC TGTGTCTATT ATTATATTCA TATCTCTACG CTGGAAACTT TCTGCCTCAA TGTTTACTGT 004080 004081 GCCTTTGTTT TTGCTAGTGT GTGTTGTTGA AAAAAAAAAC ATTCTCTGCC TGAGTTTTAA TTTTTGTCCA AAGTTATTTT 004160 004161 AATCTATACA ATTAAAAGCT TTTGCCTATC ACTCTGGACT GTTGGATTGT TTTTTACATT CAGTGTTATA ATCTTTTGTT 004240 004241 ATGCTGATTG GTTTTGGTGG GTACTGATGT GAATTAATAA AAACATTTCC ATTTC

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