NONHSAT118990
Revision as of 06:27, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118990 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
557 nt |
Genomic location |
chr7-:6226695..6312275 |
Exon number |
5 |
Exons |
6226695..6226747,6227288..6227352,6228336..6228520,6230080..6230162,6312105..6312275 |
Genome context |
|
Sequence |
000001 ggaggaggcc cggccgcgac ccgggccgcg cgcTGAGGAG CCGCCCGGTC GCCTGCGCGC TCCCTCCGGC GGCGTCCCCA 000080
000081 GCCCGCGGCC CCTCTGCTGC CGGCCCCCGG CTCGCCGGCT GCGGGAGTGG CCTCAAGATG GATGAAGACg gcggcggcga 000160 000161 gggtggtggc gTGCCTGAAG ACCTCTCATT AGAAGAGAGA GAAGAACTTC TAGACATTCG TCGAAGAAAA AAGGAACTTA 000240 000241 TTGATGACAT TGAGGTTACC CTTCATTCTT GGGAAAATCA GATAACCCAG AATTGGTCTC TGGTTGAAGA ATAAGGATGT 000320 000321 ATATTATTTG GACCTTAGTA ATCAGCCTGC TGGATAAATG TGGAATCGTA atctagctct aactacttca ttttatcagt 000400 000401 gagcacactg aggcccaggg aagttggagg cttccagagA GGCTGAAATA TGAAATTGCA GAGGTGATGA CAGAGATCGA 000480 000481 CAATCTAACT TCCGTAGAGG AGAGCAAAAC GACTCAGAGG AACAAACAGA TAGCCATGGG AAGAAAGAAA TTCAACA |
Predicted Small Protein
Name | NONHSAT118990_smProtein_137:313 |
Length | 59 |
Molecular weight | 6709.2031 |
Aromaticity | 0.0344827586207 |
Instability index | 68.3344827586 |
Isoelectric point | 4.19305419922 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0227973071111 |
Amino acid sequence | MDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIEVTLHSWENQITQNWSLVEE |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLEEEEEELLLLLEEELEEEELL |
PRMN | - |
PiMo | - |