NONHSAT119197
Revision as of 06:27, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119197 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
478 nt |
Genomic location |
chr7-:11046026..11046503 |
Exon number |
1 |
Exons |
11046026..11046503 |
Genome context |
|
Sequence |
000001 tttcacaaga cagTGCCGAA AGTGAAGGAA GCTCCTGTCC CTCCTAAAGC TGAAGCCAAA CCGAAGGCTT TCAAGGCCAA 000080
000081 GAAGGCAGTG TTGAAAGGTG TCCACAGCCA CCAAAAAAGA AGATCCGCAT GTCACCCACC TTCCAGCAGC CCAAGACACT 000160 000161 GAGACTCTGG AGGCAGCCCA GATATCCTCG GAAGAGCTCC CCCAGGAGAA ACAAGCTTGA CTACTATACC ATCATCAAGT 000240 000241 TTCTGCTGAC CACTGAGTCT GCCATGAAGA AGATAGAAGA CAACAACATG CTTGTGTTCA CTGAGGAAGT TAAAGCCAAC 000320 000321 AAGCACCAGA TCAAACAGGC TGTGAAGGAG CTCTGTGACA TTGATGTGGC CAAGGTGTCA ACACCCTAAT TCGGCCTGAT 000400 000401 GGAGAAAAGA AGGCATATGT TCGACTGGCT CCTGATTACA ATGCTTTGAA TCTTGCCAAC AAAATTGGGA TCATCTAA |
Predicted Small Protein
Name | NONHSAT119197_smProtein_128:388 |
Length | 87 |
Molecular weight | 10182.7847 |
Aromaticity | 0.0813953488372 |
Instability index | 72.0558139535 |
Isoelectric point | 9.88409423828 |
Runs | 14 |
Runs residual | 0.0231690385283 |
Runs probability | 0.0458841194135 |
Amino acid sequence | MSPTFQQPKTLRLWRQPRYPRKSSPRRNKLDYYTIIKFLLTTESAMKKIEDNNMLVFTEE VKANKHQIKQAVKELCDIDVAKVSTP |
Secondary structure | LLLLLLLLLEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHLLHHHHHHHHLLLLEEEEEH HHHLHHHHHHHHHHHHLLLLEEELLL |
PRMN | - |
PiMo | - |