NONHSAT119271
Revision as of 06:28, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119271 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
697 nt |
Genomic location |
chr7-:15025003..15025699 |
Exon number |
1 |
Exons |
15025003..15025699 |
Genome context |
|
Sequence |
000001 CGCCACATCC TGATTCACAT TGGAGAAAAG CCTTTTATTT GTGCAGCTAG TGGCTGTGAT AAAAAAAAAA AAAAGAATCC 000080
000081 CACAGAAAAT CCAACTGGAA GAAACATTTT GCATGCAAAC ATGAAAATCT GCAAAAGCAA TATGTATGCA ATTTTGAAGG 000160 000161 ATGTAAGAAG ACCTTTAAGA AGCATCAGCA GCTGAAAATC CATCAGTGCC AGCATGAAAA TAAACCCCTA TTCAAGTTTA 000240 000241 ACCTTGAAGG ATGTGGAAAA CACTTTGTTT CACCCTCCAG GCTGGGAGGA CAGATGCAGG TTCATCAGAA AATTATATGT 000320 000321 CAATAGGGAT GTTCTTTTGT GGCAGAAACA TGGACAGAGA GAAATCCATA GAAAGGAAAT AACATGATGT ATGCCAGAAA 000400 000401 ACATTCAAAT GTGAAGATTA TCTCAGATAA CCTGTGAAAA CTCATGCCTC AGAAAGAGAT GTATGTCAAC ATCCAAGAGA 000480 000481 AGACTGCAGA AGAACTGTAT TTAATCTCCA GAGCTGTCTT CTTTCTTTTC ATAAGGAGAA GCACCCATTT ATGTGTGAAC 000560 000561 ATGCTGGCTG TGGCAAAAGG TTGGCTATGA AACAAACTCT CACAAGACAT GCTATTGTGT ATGAGCTTGA CAGGAAGAAA 000640 000641 ATAAAGATCA AAGTAAAGCT ATCTTCTGAA AAATGAAATT TGGCCTCTCA TCTCAGT |
Predicted Small Protein
Name | NONHSAT119271_smProtein_443:589 |
Length | 49 |
Molecular weight | 5689.7397 |
Aromaticity | 0.125 |
Instability index | 74.7520833333 |
Isoelectric point | 9.03363037109 |
Runs | 4 |
Runs residual | 0.0822368421053 |
Runs probability | 0.00865571453805 |
Amino acid sequence | MPQKEMYVNIQEKTAEELYLISRAVFFLFIRRSTHLCVNMLAVAKGWL |
Secondary structure | LLLLEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiii |