NONHSAT119271

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT119271

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

697 nt

Genomic location

chr7-:15025003..15025699

Exon number

1

Exons

15025003..15025699

Genome context

Sequence
000001 CGCCACATCC TGATTCACAT TGGAGAAAAG CCTTTTATTT GTGCAGCTAG TGGCTGTGAT AAAAAAAAAA AAAAGAATCC 000080
000081 CACAGAAAAT CCAACTGGAA GAAACATTTT GCATGCAAAC ATGAAAATCT GCAAAAGCAA TATGTATGCA ATTTTGAAGG 000160
000161 ATGTAAGAAG ACCTTTAAGA AGCATCAGCA GCTGAAAATC CATCAGTGCC AGCATGAAAA TAAACCCCTA TTCAAGTTTA 000240
000241 ACCTTGAAGG ATGTGGAAAA CACTTTGTTT CACCCTCCAG GCTGGGAGGA CAGATGCAGG TTCATCAGAA AATTATATGT 000320
000321 CAATAGGGAT GTTCTTTTGT GGCAGAAACA TGGACAGAGA GAAATCCATA GAAAGGAAAT AACATGATGT ATGCCAGAAA 000400
000401 ACATTCAAAT GTGAAGATTA TCTCAGATAA CCTGTGAAAA CTCATGCCTC AGAAAGAGAT GTATGTCAAC ATCCAAGAGA 000480
000481 AGACTGCAGA AGAACTGTAT TTAATCTCCA GAGCTGTCTT CTTTCTTTTC ATAAGGAGAA GCACCCATTT ATGTGTGAAC 000560
000561 ATGCTGGCTG TGGCAAAAGG TTGGCTATGA AACAAACTCT CACAAGACAT GCTATTGTGT ATGAGCTTGA CAGGAAGAAA 000640
000641 ATAAAGATCA AAGTAAAGCT ATCTTCTGAA AAATGAAATT TGGCCTCTCA TCTCAGT
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Predicted Small Protein

Name NONHSAT119271_smProtein_443:589
Length 49
Molecular weight 5689.7397
Aromaticity 0.125
Instability index 74.7520833333
Isoelectric point 9.03363037109
Runs 4
Runs residual 0.0822368421053
Runs probability 0.00865571453805
Amino acid sequence MPQKEMYVNIQEKTAEELYLISRAVFFLFIRRSTHLCVNMLAVAKGWL
Secondary structure LLLLEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiii