NONHSAT119800
Revision as of 06:30, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119800 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
806 nt |
Genomic location |
chr7+:29642552..29644065 |
Exon number |
2 |
Exons |
29642552..29643065,29643774..29644065 |
Genome context |
|
Sequence |
000001 TCCTTAAATT CCATGAAATC ATGGCATGAT TTCAGCTACA GCTTATATAA TTATAGGTCC ATCCTTCTAG GCTAACGTGT 000080
000081 TGTTTATGAT GCTCTTCATA ATGTCAAAGA ATTTCCACAA TCACTAATTG TCTGTTAATC TCTATCTTCT GTTTCCCCTA 000160 000161 CCATTTACAT TAAAGTACCT TGAATGTTCA TAACATTTCC AACATCAGGC ACGATTCTCA TCTATTTCTT TGGGCCAGGT 000240 000241 GCAGCACAAT CACCCATAAA CCCTTTGCTA GTCAATAGAA AGGTACACTT TCTGCCAGAA TTTAAAAGTA ATTAAAGAAA 000320 000321 GAGAAGTCAC AGGAATGTAA ATTACATATC TTATGGAACA ATTCTGATAG ACCTATGGAG ATTTCACTGG CTGAAAGCAG 000400 000401 TTGCAGTAGG GAGCACAAAC CCTCATTGGC CAAGAGTGAA CAATTGAACC TGCTCTGTTG ATCTCCTTGG CTGAGAGTGT 000480 000481 AGAGCAGTAC AGAGTTTGGG GGAAATATAT CATGAGTATG ATTTTGTATG CAGAAATATG CAATCTTTAA GTCTCCTGAT 000560 000561 ATATTGTGCT GTGTAGTTTT TCAGGATGTT GGCCAATTTA TGCTTCCATA AGCAGTTATT CACTCATTTC TTTATTCATG 000640 000641 AACCCAACAA ATATTAGTTT GTTGTCTGAT GTGCCTGCTA CTCTGCCTAG AGCTGGAGTT ACCATGGTAA GCAATCCAGA 000720 000721 CATGGTATCT GCCCTCATAG GGTATATACG TATTAATCAA ATGGATGTGT AATTTTTAAA AACTGTGATA AATGCTATGA 000800 000801 AGGAAA |
Predicted Small Protein
Name | NONHSAT119800_smProtein_374:460 |
Length | 29 |
Molecular weight | 3104.5349 |
Aromaticity | 0.0 |
Instability index | 72.5071428571 |
Isoelectric point | 5.54852294922 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0472354707648 |
Amino acid sequence | MEISLAESSCSREHKPSLAKSEQLNLLC |
Secondary structure | LEEEELLLLLLLLLLLLHHHHHHHHHLL |
PRMN | - |
PiMo | - |