NONHSAT119884
Revision as of 06:30, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT119884 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
591 nt |
Genomic location |
chr7-:30564030..30601373 |
Exon number |
4 |
Exons |
30564030..30564102,30590252..30590397,30591716..30591795,30601082..30601373 |
Genome context |
|
Sequence |
000001 gagtcccaag aaaaatcact tgagacacca agaaaatggg ggaagtgcta aaattgtgtg ggaattcaag cttaacaata 000080
000081 aacatcaaga catttttgat aaaaatgaat ccactgacat cggggaggag caagagaaca gcacgctgac actgggtcag 000160 000161 aggctaagac cgacatttct gggaaccact cccggaaggg cacagaggag acgctttcag cctctcatca gccagcctgg 000240 000241 cctgtagctg ctgcacgtta tgagtgtgtt cctggcatga ctgcttctaa cagcgaccat ttcattaagt ttttaagtgc 000320 000321 ctggtaattg cttggttatg accggtgtct gctccatggc agcctcttcc tgAAGAAATG CTGAGGCAGT GTCACGCTGG 000400 000401 TGTCTGTCCT CCTTACAGAA TGCCTGAACA GTTCCATTGA CTCAAAGTGA AGATCAAAAG AACCAAATGA CAGCAATAGC 000480 000481 CAAGTGTAAT CATCAGTAAC CCTGTGTTCT ATCCACAGTT AAAAGAATAT TGGCAGAGAA ACAGCCTTGG TGTTCCAGCA 000560 000561 GGAGTGAAGA GGAACAGGAA AACGAGTGGC A |
Predicted Small Protein
Name | NONHSAT119884_smProtein_35:148 |
Length | 38 |
Molecular weight | 4079.8557 |
Aromaticity | 0.027027027027 |
Instability index | 45.3540540541 |
Isoelectric point | 11.0751342773 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0428495722613 |
Amino acid sequence | MGEVLKLCGNSSLTINIKTFLIKMNPLTSGRSKRTAR |
Secondary structure | LLLEELLLLLLLEEEEHHHHEEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |