NONHSAT120963
Revision as of 06:35, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120963 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
693 nt |
Genomic location |
chr7-:63423809..63424501 |
Exon number |
1 |
Exons |
63423809..63424501 |
Genome context |
|
Sequence |
000001 TTACATTCCA CTGCTTCCAT TTTAAAAATG CCTCTTTTTT CAAGCTGGCA TTGGGATCTC AACCAACAGT TTCCTCCTTC 000080
000081 TATTCCATGT CTTCACACTT TTTCTAGATC AGAGGCCTAA GCCACTGACG TGACCTTCTG TCACCTGACC CTCATCCACA 000160 000161 TAGTGATGCT CCTGGCTGTG GTTTCACTGT TGTCTCCAGG TCTGTTTGAG TCACTGTAGT TTCAGAATGA CTTCAAGTAT 000240 000241 AAAGTATCTT TTTCACCTGA ATAAGGTGGG ACCTTGAGCA ATCTTCTGCA TTTCAGTAAA TACTGCTCGC TTTTCCCATG 000320 000321 AAGTCCACCA TCAGAGGTCA GAGGACTGTT TCTTATTCTG TCATTATCCA GATATGTTTT TCTTGCAGGA CCGATGCTGC 000400 000401 TTTCAAGTGC ATACATGGTG GTTCTTTTGC TCAGCCATCA GAAGAAATCC TGGTACCTTC ACAGCACCTG CCTCTCCCCA 000480 000481 AGACCTTCCC CAGAGCAGAG TGCCACTCAG ACCATCCTGC TGCTAGTGAG TTTCTTTGTG GTCGTGTACT CGGTCGATTT 000560 000561 CATCATCTCA TTCTCCTCAG CCTCACTATG GGCATATGAC CCTGTTGTCC TGGGTGTCCA GAGGCTTGTG TGCACCGTAT 000640 000641 ATGCCACTGT CAGTCCTTTG GTGTTCCTCA GATCTGATAA AAGAATAATC AAT |
Predicted Small Protein
Name | NONHSAT120963_smProtein_317:598 |
Length | 94 |
Molecular weight | 10293.9144 |
Aromaticity | 0.0752688172043 |
Instability index | 52.4301075269 |
Isoelectric point | 8.75372314453 |
Runs | 11 |
Runs residual | 0.0126443647949 |
Runs probability | 0.0269306739895 |
Amino acid sequence | MKSTIRGQRTVSYSVIIQICFSCRTDAAFKCIHGGSFAQPSEEILVPSQHLPLPKTFPRA ECHSDHPAASEFLCGRVLGRFHHLILLSLTMGI |
Secondary structure | LLLEEELEEEEEEEEEEEEEELLLLHHHHHHHLLLLLLLLLLEEEELLLLLLLLLLLLLL LLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |