NONHSAT121709
Revision as of 06:38, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121709 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
838 nt |
Genomic location |
chr7+:79083163..79088996 |
Exon number |
4 |
Exons |
79083163..79083560,79084182..79084323,79088163..79088315,79088852..79088996 |
Genome context |
|
Sequence |
000001 CGGGAGGAGG CAGGGGAGGA GGGGCGCGCG CGCCGGGTGG GGAGCCACGG AGGGCTTCGC CGCTGCCTCC CTCCCTCCCT 000080
000081 CCGCAGCTTG ACCCGGTAGT GAAGGCAGAG AGAGAGGCAG GCTGGGTCCG CCTGGCAGCC TACGGGAGGA GGCGGGAGCC 000160 000161 GGGAAGGAGG GGAGCCTAGG CCCGGCGTGG GGAGGCCGGC AGGAAGGGCC TCGAGCCCAG TGCGGACCTT TCTTCAGCCT 000240 000241 CTGTGCGACC GAGCCGCGCG CCAGGCTCCT GTGCGAGGAG GACGCGCTGA CTCCCTCCGA CCTGGGCTCC GATGGAGCAG 000320 000321 AAATAGCGGG ACCTGGACTT GTGGCGCGCC TGGTGCCACA TCTCGGGCTC TGCGAGCGTC CTGGCGCGGG ATCCTGCCTG 000400 000401 TTCCCTTCTT TTCGCCAGGT TTGCATCCAA GAGAGGGGAG GACAGGGGCA AAAGGATGCA GGGAGGCTGC TGATTTCCAC 000480 000481 TGAAGAGCTA ATTTCCTGTG AGACATTAAC AGTGATTTAA GAAAAAGATT CCTGTAACTG TAATGTCTTA CAATAACAGA 000560 000561 ATGCAGGAGA GCACATATCA ATGAAGAAAA GACAAAATGT ACTTATCCAT GAAGCTGAGG TTAAGAAACC AGTGTCTTCA 000640 000641 AGAGCCAGGG ACAGCACTGG GTCTGTGCAG AGTTGAGAGA TGGTGATGAC ATGTGGTTTC CAGCATTCCT CACCCAGTCC 000720 000721 AGGGACACTG TGGGTGTGCC CAGCTTAAGT CCAgtaactg gaaatacaag cccaagttct ggagagtttg agctgcagag 000800 000801 atatatatgg gaacactttg aatcttgact cattggcc |
Predicted Small Protein
Name | NONHSAT121709_smProtein_596:685 |
Length | 30 |
Molecular weight | 3466.1338 |
Aromaticity | 0.0689655172414 |
Instability index | 75.2206896552 |
Isoelectric point | 9.49444580078 |
Runs | 6 |
Runs residual | 0.0073275862069 |
Runs probability | 0.0304863687217 |
Amino acid sequence | MYLSMKLRLRNQCLQEPGTALGLCRVERW |
Secondary structure | LEEHHHHHHHHHHHLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |