NONHSAT121968
Revision as of 06:40, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121968 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
723 nt |
Genomic location |
chr7+:92025183..92027151 |
Exon number |
2 |
Exons |
92025183..92025790,92027037..92027151 |
Genome context |
|
Sequence |
000001 CCAGTTTcaa tggctcacac ctgtaatccc agctacttag gaggccgagc agtagggatt gcttgaggcc agaagttcaa 000080
000081 gaccagccta agcaacatag caagactctg actctaaaaa taaaaaaata aaaaataaaa aACCTCCCTT CAAGGAAAGC 000160 000161 CTTACTTAAA TGAGTAATAT GGTTGTAGTA TTAATTAGAT AACAAGATCC TTGAAATCAT CAGGCATATA AAATAGGGCT 000240 000241 GTTCTAATGT AGCACTGGGG CTTGCAAGTA TTCCTAATTT ATCTAGGCAA TTGTAATGAC TGTTGAAAAC TTTCTTTTTC 000320 000321 CATTTTACCT TTTGTGTTTC CTTGGCATGG CAAAACCTGA TGTTTCAGCC AAGTGATTTT ATAAGATGTG TATAAAATCA 000400 000401 CAAACTTTTT CCCCTGGAAA AAAGTGTGTA CTTTGTTTTA TTTGCATTTT AAAAATTGCA TGCTCTCTTG TATTTTATAA 000480 000481 CCTTTGGTTT ATGCAGGAAT ATGCTGAATT TCAGTATCGG AGGAGGCACA GACAACGTCG TCGAGGAGAT GTTCACAGTC 000560 000561 TACTCAGTAA TCCTCCAGAC CCTGATGAGC CAAGTGAAAG CACTTTAGAT ATTCCAGAAG GCGGCAGCAG CAGCCGCAGG 000640 000641 CCTGGCACAT CCGTGGTAAG TTCTGCATCT ATGAGTGTGC TGCACAGCTC TTCCCTGCGT GACTACACCC CTGCCAGTCG 000720 000721 CTC |
Predicted Small Protein
Name | NONHSAT121968_smProtein_500:607 |
Length | 36 |
Molecular weight | 3836.4514 |
Aromaticity | 0.0857142857143 |
Instability index | 47.1028571429 |
Isoelectric point | 4.13690185547 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0266560678326 |
Amino acid sequence | MLNFSIGGGTDNVVEEMFTVYSVILQTLMSQVKAL |
Secondary structure | LEEEEELLLLHHHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |