NONHSAT122092
Revision as of 06:40, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122092 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
831 nt |
Genomic location |
chr7+:95306193..95308564 |
Exon number |
2 |
Exons |
95306193..95306656,95308198..95308564 |
Genome context |
|
Sequence |
000001 AATGATAAGA ACACACAGGA TCCTAGGTAT ATGCCCTTCT GGAGATACGC TCGAGGGGGT AGCATGTGTT ATTCATTACA 000080
000081 TCACATATAA CCTTTTCAAA TTTACAATCA ATCTTGCTTG GAAGTCTGGT GTCATTTAAA AAGCACGGCA GTGTGCTGGG 000160 000161 AGGAGAGACA ATCTGAGGAG GCTACAGTCT GTGAATCCAA ATACCCTATT TAAAGATCCA AACATGAAGA AGGAGGATGT 000240 000241 ACTAAACACA TCATTTTCCT TCCAAGTGAT TGAAAAGGGA TGGTACATTG AAGTTTTGTT GGGTTTCAAT GCACTGATTT 000320 000321 CTTCCCTACC TGTTTTTCTC AGGTTTGTCA GGTACTTAAG AGTCTATTTC AAATTGCCTG CAGACTCTTT TTCTCATGTT 000400 000401 TCTTAAAACT ATTTGTGATT AAATCACCCA CATTGTCCTC TAGGCTCTAA TGATTCTCTT CCCGTTTTTT TTTCTTTTTC 000480 000481 TTTTTTTTTT TTTTTTGAGA CAGAGGACAG AGTCTCCCTC TGTTGCTCGG GCGAGAGGGC AGTGGCGCTA TCTCGGCTCA 000560 000561 CCGCAAGCTC CGCCGCCCTG GTTCACACCA TTCTCCTGCC TCAGCCTCCC GAGTAGCTGG GACTACAGGC ACCCGCCACC 000640 000641 GCGCCCGGCT AATTTTTTGT ATTTTTAGTA GAGACGAGGT TTCACCGTAT TAGCCAGGAT GGTCTCGATC TCCTGACCTC 000720 000721 GTGATCCGCC CGCCTCGGCC TCCCAAAGTG CTGGGATTAC AGGCGTGAGC CACCGCGCCC GGCCTAGAAT CTGCTTTTTA 000800 000801 ACAACATAAT TCAAGTTTGA GAAGCTCTGC T |
Predicted Small Protein
Name | NONHSAT122092_smProtein_449:667 |
Length | 73 |
Molecular weight | 8679.9886 |
Aromaticity | 0.263888888889 |
Instability index | 76.9347222222 |
Isoelectric point | 10.8060913086 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.0238670042592 |
Amino acid sequence | MILFPFFFLFLFFFFLRQRTESPSVARARGQWRYLGSPQAPPPWFTPFSCLSLPSSWDYR HPPPRPANFLYF |
Secondary structure | LEELHHHHHHHHHHHHHHLLLLLHHHHHHLLEEEELLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLL |
PiMo | i??????????????????????????????????????????????????????????? ???????????? |