NONHSAT122635
Revision as of 06:43, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122635 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
993 nt |
Genomic location |
chr7+:105551485..105564629 |
Exon number |
4 |
Exons |
105551485..105551687,105552929..105553084,105559981..105560053,105564069..105564629 |
Genome context |
|
Sequence |
000001 TCCTGAGGAA CCTCAGATTT GAAAGAAGAG TGAATGGAAG TCaaatgtgg aaaccactca aatgtccatc aactgatgaa 000080
000081 tgaataaaca aatcatggta tatccataca aggaatatta ttcacccata aaaaggaatg aagtcttaat acacctacaa 000160 000161 ctggatgaac attgaaaaca ttatgctatc cattctgctt cagACCGGAA AGGAGAAACA GTCTAAACTG CATGAAAGTC 000240 000241 CTGGTACTGC TGTATCTCGT ACTATAAGTT CAGTTTTCTC CCTTCACCTG AGGGTAAGTT GAAGAATAAC TTCATAAGCC 000320 000321 AGGGAGAGAT ACGTTTGGAT CAGGAGTTAG TGATAACAGa ttgtgagatc catgagagcc cagaaaatat cttaggatcc 000400 000401 ctagtgctta gcacagagct tggcatatgg agCATCCACC TGATTTCTGG AAGGCATTGC TTCACTTTCA TAGACAGAAG 000480 000481 ATGTAACGAC TGCCACGAAG ATCCCTGGAG CTCTGCCTGG CGATTCTCAC TCCCACTGGG TAGCTGACAA ATTTTCCCTG 000560 000561 AGAAGACATG GTTTCCTCCA GCAGCAGCAG AAGGAGTCAT GGGTTTTTCT GTTTCATGGC TCAAACTGTT GTGACTCGGA 000640 000641 ATTATACTAG GACAGGGCCC TGACTTATTC TTCTGGGCTG GGCTGAGTAA GGCCTGGCTG AGTGTAGCTG GGTACACAGG 000720 000721 TAGGGGTGGA ATCAAAGCTG GAGGTACCCA TAATGCTGGT TAGGAGGATA ACTAGCTAGA ATAAGGTTGG CAAGAACTGG 000800 000801 GTGAGCAGGG ATAGGAATTA AGACTGAGGA CTGGGCTGAG GGTAGGTCAG GGGTTCTGGC AGCAACACAG CTGGAATGAA 000880 000881 TGGAGAAGCA CACAAACAAA ACCAAGCTAA GAAGAGCCTA GATcaagctt gtccaaccca tggcccacag gctccatgtg 000960 000961 gcccaggatg gctttgaatg tggcccagca caa |
Predicted Small Protein
Name | NONHSAT122635_smProtein_164:301 |
Length | 46 |
Molecular weight | 4981.7484 |
Aromaticity | 0.0222222222222 |
Instability index | 84.9511111111 |
Isoelectric point | 9.69415283203 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0351275645394 |
Amino acid sequence | MNIENIMLSILLQTGKEKQSKLHESPGTAVSRTISSVFSLHLRVS |
Secondary structure | LLHHHHHHHHHHHLLLHHHHHHLLLLLLEEEEEEEEEEEEEEEEL |
PRMN | - |
PiMo | - |