NONHSAT122806
Revision as of 06:43, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122806 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
876 nt |
Genomic location |
chr7-:112593368..112635698 |
Exon number |
4 |
Exons |
112593368..112593811,112594658..112594823,112596577..112596766,112635623..112635698 |
Genome context |
|
Sequence |
000001 tgaggagata agtgacataa actggcatgt tctgaaagaa tcactctgga tgctgtgtgg agaaaacact gaaaagTCTT 000080
000081 TATAGGGGGA GAATAATTGA CTCCATtcaa gtgttcgctc ctgtttcaat caactatggc tgaagagtga ggagacattt 000160 000161 ggaataaata tggcttctgg gggcccattc CTATGGATCA GCAGCTGGCT TCTGGAGGCC CATTCCTGTG AATCGTCGAT 000240 000241 CTCATAGAAG ATAATATTGT TAGAAGGCTT ACCTCATTGA TGCTGAACAT CCTAAAAAGC TTCTGCTGCT TTGAGTCACT 000320 000321 GAAAAAGACC AAGAAACATG aatttaaaaa aaaatttcaa atgttataaa ataaataata tGAACTCATT ATACCTACAA 000400 000401 TGAATAATTT AAATTCTTCT TTGGTAGTCC AGCATAGGTT TAGaaactat gaaaacccta gaagaaaacc taggcaatgc 000480 000481 cattcaggac ataggcacgg acaaagattt catgacgaag acgccaaaaa caactgcaac aaaagcaaaa attgacagat 000560 000561 gggatctcat taaactaaag agcttccata cagcaaaaga agctaccatg agagtgaaca gacaacctat agaaagggag 000640 000641 aaaaattttg caatctgttc atctgacaaa ggtctaatat ccagcatcta caaggaactt aaataaattt acaagaaaaa 000720 000721 aacaaaccca ttagaaaatg ggcaaaggac atgaaaagat acttctcaaa agacatacat gtggccaaca atcatacaaa 000800 000801 aaaaacctca acatcactga tgattagaaa aatgctaatc aaaaccacaa cgagatacca tctcatacct gtcaga |
Predicted Small Protein
Name | NONHSAT122806_smProtein_737:826 |
Length | 30 |
Molecular weight | 3356.8326 |
Aromaticity | 0.0344827586207 |
Instability index | 56.8137931034 |
Isoelectric point | 9.43011474609 |
Runs | 6 |
Runs residual | 0.0073275862069 |
Runs probability | 0.0429988812341 |
Amino acid sequence | MGKGHEKILLKRHTCGQQSYKKNLNITDD |
Secondary structure | LLLLHHHEEELLLLLLLLLHHHHLLLLLL |
PRMN | - |
PiMo | - |