NONHSAT123425

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT123425

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

712 nt

Genomic location

chr7+:131771025..131772751

Exon number

3

Exons

131771025..131771138,131771632..131771962,131772485..131772751

Genome context

Sequence
000001 ATGGAAGACT CCCACTTAAA TCCTAACTTG TATGTCTGGC CTTGCATCCC CACCATCTCA GGGCCAATTG AGAACACCAT 000080
000081 GCTTGTCAGC AGGATGGAGG CTGAGCCCTC ACCATCCCCT CAGGCTTTCT TGGGGCTACA GCCTGATCGG CTCTGAACCT 000160
000161 CCCCATCTGG CTTCCCATGA TTGTCTTTGC TCCTCCCTCT GCCTCACAAG TCCTGCAGGT GGTTCGTGAC CTCTCCAAGA 000240
000241 AGATGGTGTT GGCCTAACGA GAGGGAGGTA GAAGGTGATG GAAGTGGCAG TGTGGTTTCT AATCTCCCAT CCCCCACCCC 000320
000321 AACCCCTGCC CACACAGAGG GCCAAAAGAA GCAGCAATGC TGGAATCAGG GTTGCCTGAG ATAAATGAAC CTTAGGCCCT 000400
000401 CTTCCCTACG GAGAATGATG ACCATCAGAA AGATGGAATG ACTTAAGGGG CACCTGTCTA CCTGTCTATG CTACAGTGAA 000480
000481 GCACACCAAG GAGGACACCC AACTCTCTGC AGTTGGGCCT GTCCGTCTGA AACATCCCTT AGGAAACACA GGCACAAACA 000560
000561 CAGCCCTCCT GATCTCCAGC AGCATGGGCA GGTGGCAGTG ACAGCAGCGG TGGCTCAGGC CCAGGTCCAG GCCTCCCAGA 000640
000641 CATAGCAGTA GCAGCCTTAG CCACCACCCA TCCAGTCCCC TGCAGTATCC TCCCAGGATA GGGACAGCAA TC
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Predicted Small Protein

Name NONHSAT123425_smProtein_176:256
Length 27
Molecular weight 2828.4386
Aromaticity 0.0384615384615
Instability index 55.2576923077
Isoelectric point 9.99237060547
Runs 5
Runs residual 0.0169946332737
Runs probability 0.00614732379438
Amino acid sequence MIVFAPPSASQVLQVVRDLSKKMVLA
Secondary structure LEEELLLLHHHHHHHHHHHHHHHHLL
PRMN -
PiMo -