NONHSAT123434
Revision as of 06:46, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT123434 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
753 nt |
Genomic location |
chr7+:132443729..132445392 |
Exon number |
2 |
Exons |
132443729..132444165,132445077..132445392 |
Genome context |
|
Sequence |
000001 gcgcccttat aagaagagga agagagagat cgctttccac tgaaatgtac cgaggaaagg ctatgtgagg acatagccca 000080
000081 gaagaggccc tcaccagagc ccagctatgc tggcaccctg acctcctgct ccagcctcca gactgtgagg aaatacgttt 000160 000161 ccatggttga agccacccag tctatggtat tttgttgtgg ctgcctgagc taaGACACCA TCACACAATG ACCAGGGAGG 000240 000241 CTCTTTGGCC GTGGTCAGCA GAGGCAGCTG TGCCACTGCC TGTGGGTGCC ACGCCTGCCT CACAGCAGCA ACTTCCTCAT 000320 000321 AAGAAAGTCT CTGCTGTTAT TTAGATGTGT GTCTTGTCTC CCAGACTCAG ATACAAGCCC ATCAAGGCAG TGAGGTTGAC 000400 000401 ATCTTTTTTT CTGACTTGTC TGCAAACCCG TCATGAGGGA TTGTTGCACA GTCATgtttg ggtaatgcca cgtacagtct 000480 000481 ttccttctta ggcaattata ttagcagtta aaggctctga gaagttttgc aatgaagatg ctgtcataag tttgtctaat 000560 000561 tcagcatttg acaacagaac tgattttcct agcaacattt TGGTCCAGAG AGAAGGTGAT GCAAGATGCA GAAATGACTG 000640 000641 AGAGTATGGT GAGCACTTGT TCACTACGCC AGAAATAAAA GATCATTGAA GTGAGATTGA TTAAAACTAC AATCAATAAA 000720 000721 AGATCATTGA AGTGAAATTG ATTAAAACTA CAA |
Predicted Small Protein
Name | NONHSAT123434_smProtein_344:490 |
Length | 49 |
Molecular weight | 5653.7624 |
Aromaticity | 0.104166666667 |
Instability index | 43.5625 |
Isoelectric point | 10.8950805664 |
Runs | 10 |
Runs residual | 0.0427631578947 |
Runs probability | 0.047385620915 |
Amino acid sequence | MCVLSPRLRYKPIKAVRLTSFFLTCLQTRHEGLLHSHVWVMPRTVFPS |
Secondary structure | LEEELLLLLLLLLEEEEEEHHHHHHHHHLLLLLLLLEEEELLLEELLL |
PRMN | - |
PiMo | - |