NONHSAT123449

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT123449

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1344 nt

Genomic location

chr7+:133446300..133447624

Exon number

1

Exons

133446300..133447624

Genome context

Sequence
000001 GGGCTGATGC GTTGGCTGTT GACTCAGTGA AGTTCCCACG GCTGGCTTTG GCAACAGACC TAGGGCTAGA CTATGTTGCC 000080
000081 TGGAAGATAA AGAAGCATTC ACTGCTCTTC CCATCCCACT GTATTGCCTG GCTAGTGTTT GATCAGCTTT TCAATGTGCG 000160
000161 GTCAAGTTGT TGATTGAGCT AGTAACTTAT AAGTGAATTA TCTTTATGAT TGTGTTCATT TCTAACCATG TCCCTGTGCA 000240
000241 GTTTACGAAC AATACTAATC ATAAGCAAAT ACTTTCACCT GGGCCCAATG ATTTTTACCT GTACTGACCA AGTGAACAAC 000320
000321 TTAGGCTGGC TTATGCCAGT GAAGTGGTGC TTCTCCCTCC TGACATGAGA CTTCACTGAA GTGACTTGCC AAGAAGAAAT 000400
000401 GAGAAGATGG CACGTGGAGA GTCATGTGGA TGCTCTTCTC TGCCTCAAGC TCAGCTCTCA CGTGCTTGAT CTGTTCTGTC 000480
000481 TGTGTCCTTT AATATAAATG TTTAAATGTT TAAATGTCAT TGGGTACTTG GTTATAGGAG GAGGCAGAGC TCTGAGTGGA 000560
000561 ATCCATGATG GTCCTGAGAC CAAAGATATG TATTTTTTTC TTTTCATGTA TGTATGTCTT ATATCCCCAA TTGAGAATTC 000640
000641 TATCACTGTG AGTGATACAG CTTCAGAATC CTGAAGGCTA AGCTATTAGG TTTGAACAAT ATGAAATTGC TGGTTTGCAA 000720
000721 CTATATTATA TCTACAAAAG GGCAAGTTCA TATAGCTTAA CCTAAAAAGT AAAAATCAAA TGACATCAGG TATGTGCAAA 000800
000801 AATGTCATAA ATGGCTGGTG AATATATAAG AAGTTCAACA TTACTAAGAG CCAAAAATTG AAAATTAAAA TAAGAAACCT 000880
000881 TTTTTTTACT TCATCAAATA GTAAACCAAC AATTAGTCCT ATACTTTCCT GGTTTGAGCA TTGATTAATA CAACCAGTAA 000960
000961 GTATGCAAAT ATTTAAACTC AGTGTTTTTC ACTGATAGAT ATTTATATCA AGGTGCTAGA TTGATATGCA TATAAATATT 001040
001041 TTTGCACAAA TATGTTCACA ATTTGTTTAT AACAGCAGAA AATGGAAAAC AAACTAAATA GCAATAGGGA ACGTAAGTTA 001120
001121 ATCATGCTGT ATCCATATTA CGTAGTGTTA TATAATTAAA ATTACATAAT TTATTAAAAT GATATTTACC AAGTGTTTTT 001200
001201 AATGACACTG GAAAACATGT AGAATATAAG AAGTGAATAA TTTCCGAATA GTATGTACAA TATGATAATT GTGTAAAAAG 001280
001281 CTGTAAACAT AGAAAAGAAC AAGAAAATAC ACCAAGACAT TGATAATGAA AAAAAAAAAA AAAA
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Predicted Small Protein

Name NONHSAT123449_smProtein_497:673
Length 59
Molecular weight 6352.31
Aromaticity 0.120689655172
Instability index 47.6965517241
Isoelectric point 4.58123779297
Runs 10
Runs residual 0.01582038651
Runs probability 0.0475269387035
Amino acid sequence MFKCLNVIGYLVIGGGRALSGIHDGPETKDMYFFLFMYVCLISPIENSITVSDTASES
Secondary structure LEEEEEEEEEEEELLLLEELLLLLLLLLLHHHEEEEEEEEEELLLLLEEEEELLLLLL
PRMN -
PiMo -