NONHSAT123753
Revision as of 06:47, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123753 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
952 nt |
Genomic location |
chr7-:141503501..141504452 |
Exon number |
1 |
Exons |
141503501..141504452 |
Genome context |
|
Sequence |
000001 ATATGCCTAT AATTAACCTT CTCCTACTTA TCATTCCAAC TCTAATCGCT ATAGCATTCC TTACAATCAT TGAACGAAAA 000080
000081 ATCTTAGGCT ATATACACCT ACGCAAAGGA CCTAACATTG TAGGTGCCTG CGGACTGCTT CAACCATTCG CTGACGCAAT 000160 000161 AAAACGTTTC ATCCAAGAGC CCTTACAGAC CTCAACATCT ACATCTACTA TCACCCTTTA TATTATTGCT CCAACCCTGG 000240 000241 CCCTTTCTAT CACTCTTCTC TGTGAAGTCC CCTCCCTATA CCAAATCCCC TAATTAATTT TAATACAGGC CTCCTATTTA 000320 000321 TACTAGCCAC ATCAAGCCTA GCCGTCTACT CTATTCTATG ATCAGGATGA GCATCTAATT CAAATTATGC ACTAATCGAT 000400 000401 GCATTACGAG CTGTGGCCCA GACAATTTCA TATGAGGTCA CCCTAGCCAT TATCCTCCTA TCAGTCCTAC TGATAAGTGG 000480 000481 CTCATTTAAT TTATATGCAC TCATCACAAT GCAAGAATCC CTCTGACTGC TTCTACCATC ACGGCCCCTA GCCATGATAT 000560 000561 GATTTATCTC CACATTAGCA GAAACTATCC GAGCCCCTTT TGATCTAACA GGAGAGTCAG AGTTAGTCTC AGGCTTCAAC 000640 000641 ATTGAACATG CCACAGGTTC ATTTGCTCTC TTCTTTATAG CAGAATATAT GAATATTATC ATAATAAATG CCCTAACTAC 000720 000721 TACTATTTTC CTAGGAGCAC TGCACACTAG ATATTCACCA GAACTCTATT CCACAAATTT CATTACCAAG ACCCCCCTTT 000800 000801 TAACCACCCT GCTTTTATGA ATTCAAACAG CATACCCCCA ATTCTGCTAT GACCAACTCA TATCTTCTAC GAAAAAATTT 000880 000881 CCTATCACTT ACACTAGCAT TTTGCATGTC ATATATCTCA ATGCCCGTCC TAATTTCCAG CATTCCACAC CA |
Predicted Small Protein
Name | NONHSAT123753_smProtein_2:292 |
Length | 97 |
Molecular weight | 10526.6745 |
Aromaticity | 0.0625 |
Instability index | 50.0583333333 |
Isoelectric point | 8.73797607422 |
Runs | 14 |
Runs residual | 0.0115979381443 |
Runs probability | 0.0577384106796 |
Amino acid sequence | MPIINLLLLIIPTLIAIAFLTIIERKILGYIHLRKGPNIVGACGLLQPFADAIKRFIQEP LQTSTSTSTITLYIIAPTLALSITLLCEVPSLYQIP |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHHHLLEEELLLLLEEELLLLLHHHHHHHHHHHHLL LLLLLLLLLLEEEEHHHHHHHLHHHHHLLLLLLLLL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | ooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiiiTTTTTTTTTTTTTTTTTToooooooooo |