NONHSAT124253
Revision as of 06:50, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124253 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
762 nt |
Genomic location |
chr7+:151653547..151657771 |
Exon number |
3 |
Exons |
151653547..151653694,151654868..151654971,151657262..151657771 |
Genome context |
|
Sequence |
000001 TGCTTGGAAC CCAGCCACCA TAAAGCCTGC TAGCTAAAAA AAATTTTACA TCTCTCAGTT CATTCGGCAC AGACCCCTGC 000080
000081 CTCATTCAGC TGTGACTCTG CTTGGAAAAT TCATCAGTTA CAAAGCAGCC AATGCAATTA TCTCAAGGCA TTGAATTCTG 000160 000161 CATCTTTTAG TGAAGAAAAT AACTGAACAT GGTTTTCTTC TGAAGACACA AAGTCCAAAG GCCAATCACA CACCTCTTAC 000240 000241 ATCGATCTCT TGatgcaacc atggcatccg gcaatagcca tctaCCTTGC AATATTTATA ATTACTCCTC CCTGTTCCTC 000320 000321 AGTCAAGCGC ACCAACCAGA AAATTCCTTT CCACCTATAT TCCATCCTGA TTCACAGCCA GTGAGATTTT AACAAGCACA 000400 000401 TATCAGCCAC AGTATGCCAG GGGCTTTCAG AACACCACCT TTCCACCAGC AATGGGATGC TCAGGGCCAG CCGCCTGGAG 000480 000481 GGTGGCTTAG CCCTAAAATC CCCTTTACAG CCCATTTTCC TGGACCATTA GCAACCATCA TACTAGGTCA AGTTCCCCAG 000560 000561 GAAGAAGACT ATTCGACTAA GATTTGCATG GAAAACTTTA TTCGGAGCAG ATCTGGGGAC AAACACTGCA AGGCAGGGAC 000640 000641 ACAAGTAGGT TCAATCAGAG GAAGAGCCTA GATGGCAGTG CAGCTTCCAG AAGAGACTCC ACCCACCCCA CAGGCAGCTT 000720 000721 GCGCTCTCCA GAGTCCCCCC AGATagacaa gggagctgca cc |
Predicted Small Protein
Name | NONHSAT124253_smProtein_413:670 |
Length | 86 |
Molecular weight | 9332.5207 |
Aromaticity | 0.0941176470588 |
Instability index | 58.0635294118 |
Isoelectric point | 9.23565673828 |
Runs | 11 |
Runs residual | 0.00713012477718 |
Runs probability | 0.0313307960367 |
Amino acid sequence | MPGAFRTPPFHQQWDAQGQPPGGWLSPKIPFTAHFPGPLATIILGQVPQEEDYSTKICME NFIRSRSGDKHCKAGTQVGSIRGRA |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLEEEEEELLLLLLLLLLLEEHHH HEEELLLLLLLLLLLLEEEEEEEEL |
PRMN | - |
PiMo | - |